Bio-SearchIO-blastxml v1.70 Perl 5 v5.20.1 aarch64-linux-multi
- Status
- Pass
- From
- Nigel Horne
- Dist
-
Bio-SearchIO-blastxml v1.70
- Platform
- Perl 5 v5.20.1 aarch64-linux-multi
- Date
- 2018-01-09 12:45:42
- ID
- 00b27afe-f53b-11e7-a3b7-be839ab1d982
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Christopher Fields,
This is a computer-generated report for Bio-SearchIO-blastxml-1.70
on perl 5.20.1, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/SearchIO/*.t
t/author-eol.t ........... skipped: these tests are for testing by the author
t/author-mojibake.t ...... skipped: these tests are for testing by the author
t/author-pod-coverage.t .. skipped: these tests are for testing by the author
t/author-no-tabs.t ....... skipped: these tests are for testing by the author
t/author-pod-syntax.t .... skipped: these tests are for testing by the author
t/00-compile.t ........... ok
t/SearchIO/blastxml.t .... ok
All tests successful.
Files=7, Tests=394, 5 wallclock secs ( 0.36 usr 0.04 sys + 4.56 cusr 0.65 csys = 5.61 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
----------------------------------------------- ----- --------
base 0 2.22
Bio::Root::Root 0 1.007002
Bio::SearchIO 0 0
Bio::SearchIO::IteratedSearchResultEventBuilder 0 1.007002
IO::File 0 1.16
perl 5.006 5.020001
strict 0 1.08
Time::HiRes 0 1.9726
XML::SAX 0 0.99
XML::SAX::Base 0 1.09
build_requires:
Module Need Have
----------------------------------------------- ----- --------
Bio::Root::Test 0 0
ExtUtils::MakeMaker 0 7.30
File::Spec 0 3.48
IO::Handle 0 1.35
IPC::Open3 0 1.16
lib 0 0.63
Test::More 0 1.302120
warnings 0 1.23
configure_requires:
Module Need Have
----------------------------------------------- ----- --------
ExtUtils::MakeMaker 0 7.30
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
HARNESS_OPTIONS = j4
LANG = en_US.UTF-8
LANGUAGE = en_US.UTF-8
LC_ALL = en_US.UTF-8
PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/bin:/home/njh/src/njh/smoker/bin:/usr/bin:/bin
PERL5LIB = /home/njh/.cpan/build/XML-SAX-0.99-34/blib/arch:/home/njh/.cpan/build/XML-SAX-0.99-34/blib/lib:/home/njh/.cpan/build/XML-SAX-Base-1.09-34/blib/arch:/home/njh/.cpan/build/XML-SAX-Base-1.09-34/blib/lib:/home/njh/.cpan/build/XML-NamespaceSupport-1.12-34/blib/arch:/home/njh/.cpan/build/XML-NamespaceSupport-1.12-34/blib/lib:/home/njh/.cpan/build/BioPerl-1.007002-45/blib/arch:/home/njh/.cpan/build/BioPerl-1.007002-45/blib/lib:/home/njh/.cpan/build/Test-Most-0.35-0/blib/arch:/home/njh/.cpan/build/Test-Most-0.35-0/blib/lib:/home/njh/.cpan/build/Test-Differences-0.64-0/blib/arch:/home/njh/.cpan/build/Test-Differences-0.64-0/blib/lib:/home/njh/.cpan/build/Exception-Class-1.44-0/blib/arch:/home/njh/.cpan/build/Exception-Class-1.44-0/blib/lib:/home/njh/.cpan/build/Devel-StackTrace-2.03-0/blib/arch:/home/njh/.cpan/build/Devel-StackTrace-2.03-0/blib/lib:/home/njh/.cpan/build/Class-Data-Inheritable-0.08-0/blib/arch:/home/njh/.cpan/build/Class-Data-Inheritable-0.08-0/blib/lib:/home/njh/.cpan/build/Data-Stag-0.14-44/blib/arch:/home/njh/.cpan/build/Data-Stag-0.14-44/blib/lib:/home/njh/.cpan/build/IO-String-1.08-34/blib/arch:/home/njh/.cpan/build/IO-String-1.08-34/blib/lib:/home/njh/.cpan/build/Mojolicious-7.60-12/blib/arch:/home/njh/.cpan/build/Mojolicious-7.60-12/blib/lib:/home/njh/.cpan/build/IO-Socket-IP-0.39-3/blib/arch:/home/njh/.cpan/build/IO-Socket-IP-0.39-3/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.02-44/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.02-44/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.01-43/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.01-43/blib/lib:/home/njh/.cpan/build/URI-Query-0.16-39/blib/arch:/home/njh/.cpan/build/URI-Query-0.16-39/blib/lib:/home/njh/.cpan/build/Clone-0.39-33/blib/arch:/home/njh/.cpan/build/Clone-0.39-33/blib/lib:/home/njh/.cpan/build/Test-AllModules-0.15-39/blib/arch:/home/njh/.cpan/build/Test-AllModules-0.15-39/blib/lib:/home/njh/.cpan/build/Module-Pluggable-5.2-17/blib/arch:/home/njh/.cpan/build/Module-Pluggable-5.2-17/blib/lib:/home/njh/.cpan/build/String-CamelCase-0.03-39/blib/arch:/home/njh/.cpan/build/String-CamelCase-0.03-39/blib/lib:/home/njh/.cpan/build/Class-Load-0.24-38/blib/arch:/home/njh/.cpan/build/Class-Load-0.24-38/blib/lib:/home/njh/.cpan/build/Package-Stash-0.37-0/blib/arch:/home/njh/.cpan/build/Package-Stash-0.37-0/blib/lib:/home/njh/.cpan/build/Package-Stash-XS-0.28-0/blib/arch:/home/njh/.cpan/build/Package-Stash-XS-0.28-0/blib/lib:/home/njh/.cpan/build/Dist-CheckConflicts-0.11-0/blib/arch:/home/njh/.cpan/build/Dist-CheckConflicts-0.11-0/blib/lib:/home/njh/.cpan/build/Module-Implementation-0.09-0/blib/arch:/home/njh/.cpan/build/Module-Implementation-0.09-0/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-43/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-43/blib/lib:/home/njh/.cpan/build/Module-CPANfile-1.1002-33/blib/arch:/home/njh/.cpan/build/Module-CPANfile-1.1002-33/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-43/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-43/blib/lib:/home/njh/.cpan/build/Test-SharedFork-0.35-43/blib/arch:/home/njh/.cpan/build/Test-SharedFork-0.35-43/blib/lib:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-43/blib/arch:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-43/blib/lib:/home/njh/.cpan/build/AVLTree-0.0.6-43/blib/arch:/home/njh/.cpan/build/AVLTree-0.0.6-43/blib/lib:/home/njh/.cpan/build/Test-LeakTrace-0.16-33/blib/arch:/home/njh/.cpan/build/Test-LeakTrace-0.16-33/blib/lib:/home/njh/.cpan/build/CPAN-Reporter-Smoker-OpenBSD-0.011-43/blib/arch:/home/njh/.cpan/build/CPAN-Reporter-Smoker-OpenBSD-0.011-43/blib/lib:/home/njh/.cpan/build/Test-Warnings-0.026-0/blib/arch:/home/njh/.cpan/build/Test-Warnings-0.026-0/blib/lib:/home/njh/.cpan/build/Term-ProgressBar-2.21-32/blib/arch:/home/njh/.cpan/build/Term-ProgressBar-2.21-32/blib/lib:/home/njh/.cpan/build/TermReadKey-2.37-31/blib/arch:/home/njh/.cpan/build/TermReadKey-2.37-31/blib/lib:/home/njh/.cpan/build/Class-MethodMaker-2.24-32/blib/arch:/home/njh/.cpan/build/Class-MethodMaker-2.24-32/blib/lib:/home/njh/.cpan/build/Set-Tiny-0.04-32/blib/arch:/home/njh/.cpan/build/Set-Tiny-0.04-32/blib/lib:/home/njh/.cpan/build/Pod-Usage-1.69-26/blib/arch:/home/njh/.cpan/build/Pod-Usage-1.69-26/blib/lib:/home/njh/.cpan/build/podlators-4.10-22/blib/arch:/home/njh/.cpan/build/podlators-4.10-22/blib/lib:/home/njh/.cpan/build/CPAN-Mini-1.111016-32/blib/arch:/home/njh/.cpan/build/CPAN-Mini-1.111016-32/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.45-43/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.45-43/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.44-43/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.44-43/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.42-43/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.42-43/blib/lib:/home/njh/.cpan/build/SQL-Abstract-1.84-41/blib/arch:/home/njh/.cpan/build/SQL-Abstract-1.84-41/blib/lib:/home/njh/.cpan/build/Test-Warn-0.32-0/blib/arch:/home/njh/.cpan/build/Test-Warn-0.32-0/blib/lib:/home/njh/.cpan/build/Test-Exception-0.43-0/blib/arch:/home/njh/.cpan/build/Test-Exception-0.43-0/blib/lib:/home/njh/.cpan/build/Sub-Uplevel-0.2800-0/blib/arch:/home/njh/.cpan/build/Sub-Uplevel-0.2800-0/blib/lib:/home/njh/.cpan/build/Test-Deep-1.127-0/blib/arch:/home/njh/.cpan/build/Test-Deep-1.127-0/blib/lib:/home/njh/.cpan/build/Test-Simple-1.302120-17/blib/arch:/home/njh/.cpan/build/Test-Simple-1.302120-17/blib/lib:/home/njh/.cpan/build/Moo-2.003004-39/blib/arch:/home/njh/.cpan/build/Moo-2.003004-39/blib/lib:/home/njh/.cpan/build/Sub-Quote-2.004000-38/blib/arch:/home/njh/.cpan/build/Sub-Quote-2.004000-38/blib/lib:/home/njh/.cpan/build/Role-Tiny-2.000006-39/blib/arch:/home/njh/.cpan/build/Role-Tiny-2.000006-39/blib/lib:/home/njh/.cpan/build/Module-Runtime-0.016-0/blib/arch:/home/njh/.cpan/build/Module-Runtime-0.016-0/blib/lib:/home/njh/.cpan/build/Devel-GlobalDestruction-0.14-32/blib/arch:/home/njh/.cpan/build/Devel-GlobalDestruction-0.14-32/blib/lib:/home/njh/.cpan/build/Sub-Exporter-Progressive-0.001013-0/blib/arch:/home/njh/.cpan/build/Sub-Exporter-Progressive-0.001013-0/blib/lib:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-40/blib/arch:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-40/blib/lib:/home/njh/.cpan/build/Test-Requires-0.10-0/blib/arch:/home/njh/.cpan/build/Test-Requires-0.10-0/blib/lib:/home/njh/.cpan/build/MRO-Compat-0.13-33/blib/arch:/home/njh/.cpan/build/MRO-Compat-0.13-33/blib/lib:/home/njh/.cpan/build/Hash-Merge-0.299-41/blib/arch:/home/njh/.cpan/build/Hash-Merge-0.299-41/blib/lib:/home/njh/.cpan/build/Clone-Choose-0.008-41/blib/arch:/home/njh/.cpan/build/Clone-Choose-0.008-41/blib/lib:/home/njh/.cpan/build/JSON-2.97001-0/blib/arch:/home/njh/.cpan/build/JSON-2.97001-0/blib/lib:/home/njh/.cpan/build/DBIx-Connector-0.56-31/blib/arch:/home/njh/.cpan/build/DBIx-Connector-0.56-31/blib/lib:/home/njh/.cpan/build/Test-MockModule-0.13-33/blib/arch:/home/njh/.cpan/build/Test-MockModule-0.13-33/blib/lib:/home/njh/.cpan/build/SUPER-1.20141117-33/blib/arch:/home/njh/.cpan/build/SUPER-1.20141117-33/blib/lib:/home/njh/.cpan/build/Sub-Identify-0.14-33/blib/arch:/home/njh/.cpan/build/Sub-Identify-0.14-33/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 2590
PERL5_CPAN_IS_RUNNING = 2590
PERLBREW_BASHRC_VERSION = 0.78
PERLBREW_HOME = /home/njh/.perlbrew
PERLBREW_MANPATH = /home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/man
PERLBREW_PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/bin
PERLBREW_PERL = perl-5.20.1-multi
PERLBREW_ROOT = /home/njh/perl5/perlbrew
PERLBREW_VERSION = 0.78
SHELL = /bin/sh
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/bin/perl
$UID/$EUID = 1000 / 1000
$GID = 1000 1000
$EGID = 1000 1000
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.16
CPAN::Meta 2.150010
Cwd 3.48
ExtUtils::CBuilder 0.280217
ExtUtils::Command 7.30
ExtUtils::Install 2.06
ExtUtils::MakeMaker 7.30
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.24
File::Spec 3.48
JSON 2.97001
JSON::PP 2.94
Module::Build 0.4224
Module::Signature n/a
Parse::CPAN::Meta 2.150010
Test::Harness 3.39
Test::More 1.302120
YAML 1.24
YAML::Syck 1.30
version 0.9909
--
Summary of my perl5 (revision 5 version 20 subversion 1) configuration:
Platform:
osname=linux, osvers=4.9.23-std-1, archname=aarch64-linux-multi
uname='linux scaleway 4.9.23-std-1 #1 smp mon apr 24 13:18:14 utc 2017 aarch64 gnulinux '
config_args='-de -Dprefix=/home/njh/perl5/perlbrew/perls/perl-5.20.1-multi -Dusedevel -Dusemultiplicity -Accflags=-O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -Aeval:scriptdir=/home/njh/perl5/perlbrew/perls/perl-5.20.1-multi/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=define
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -fwrapv -fno-strict-aliasing -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -fwrapv -fno-strict-aliasing -I/usr/local/include'
ccversion='', gccversion='6.3.0 20170516', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/aarch64-linux-gnu/6/include-fixed /usr/include/aarch64-linux-gnu /usr/lib /lib/aarch64-linux-gnu /lib/../lib /usr/lib/aarch64-linux-gnu /usr/lib/../lib /lib
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.24.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.24'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP
PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
PERL_USE_DEVEL USE_64_BIT_ALL USE_64_BIT_INT
USE_LARGE_FILES USE_LOCALE USE_LOCALE_COLLATE
USE_LOCALE_CTYPE USE_LOCALE_NUMERIC USE_PERLIO
USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.48
Built under linux
Compiled at Oct 31 2017 16:22:38
%ENV:
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