Back
From: metabase:user:322078bc-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Data-Babel-Client-0.02 v5.12.1 FreeBSD
Date: 2011-02-09T00:17:48Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear PHONYBONE,
This is a computer-generated error report created automatically by
CPANPLUS, version 0.9010. Testers personal comments may appear
at the end of this report.
Thank you for uploading your work to CPAN. However, it appears that
there were some problems testing your distribution.
TEST RESULTS:
Below is the error stack from stage 'make test':
[MSG] [Wed Feb 9 00:17:32 2011] Building Data-Babel-Client
[ERROR] [Wed Feb 9 00:17:48 2011] MAKE TEST failed:
# Testing Data::Babel::Client 0.02, Perl 5.012001, /usr/home/cpan/pit/rel/perl-5.12.1/bin/perl
t/00-load.t ............... ok
# Failed test 'found protein_uniprot_symbol'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_nature_name'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_reactome_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_reactome_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_ncbi_genbank'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_nature_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_kegg_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found sequence_agilent'
# at t/10-test_idtypes.t line 39.
# Failed test 'found gene_rgd'
# at t/10-test_idtypes.t line 39.
# Failed test 'found transcript_ncbi_genbank'
# at t/10-test_idtypes.t line 39.
# Failed test 'found probe_agilent'
# at t/10-test_idtypes.t line 39.
# Failed test 'found transcript_ncbi_genbank_gi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found gene_mgi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_ncbi_genbank_gi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_uniprot_description'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_kegg_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found publication_pubmed'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_biocarta_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found mutation_cosmic_mutated'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_agilent'
# at t/10-test_idtypes.t line 39.
# Looks like you failed 20 tests of 77.
t/10-test_idtypes.t .......
Dubious, test returned 20 (wstat 5120, 0x1400)
Failed 20/77 subtests
t/11-test_translate.t ..... ok
t/12-test_missing_args.t .. ok
t/13-test_bad_args.t ...... ok
t/manifest.t .............. skipped: Author tests not required for installation
t/pod-coverage.t .......... skipped: Test::Pod::Coverage 1.08 required for testing POD coverage
t/pod.t ................... skipped: Test::Pod 1.22 required for testing POD
Test Summary Report
-------------------
t/10-test_idtypes.t (Wstat: 5120 Tests: 77 Failed: 20)
Failed tests: 2-3, 10-12, 15, 18-19, 26, 37-38, 45, 50
53, 56-57, 60, 65, 68, 77
Non-zero exit status: 20
Files=8, Tests=118, 16 wallclock secs ( 0.14 usr 0.10 sys + 3.10 cusr 1.13 csys = 4.48 CPU)
Result: FAIL
Failed 1/8 test programs. 20/118 subtests failed.
BEGIN failed--compilation aborted at /usr/home/cpan/pit/rel/perl-5.12.1/bin/cpanp-run-perl line 8.
[MSG] [Wed Feb 9 00:17:48 2011] DEFAULT 'proceed_on_test_failure' HANDLER RETURNING 'sub return value'
PREREQUISITES:
Here is a list of prerequisites you specified and versions we
managed to load:
Module Name Have Want
Carp 1.16 0
Class::AutoClass 1.54 1.54
Data::Dumper 2.125 0
HTTP::Request::Common 5.824 0
JSON 2.50 0
LWP::UserAgent 5.835 0
Test::More 0.96 0
Perl module toolchain versions installed:
Module Name Have
CPANPLUS 0.9010
CPANPLUS::Dist::Build 0.50
Cwd 3.33
ExtUtils::CBuilder 0.2802
ExtUtils::Command 1.16
ExtUtils::Install 1.55
ExtUtils::MakeMaker 6.56
ExtUtils::Manifest 1.58
ExtUtils::ParseXS 2.2206
File::Spec 3.33
Module::Build 0.3607
Test::Harness 3.22
Test::More 0.96
version 0.88
******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender. As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.
If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally. We appreciate your patience. :)
**********************************************************************
Additional comments:
This report was machine-generated by CPANPLUS::Dist::YACSmoke 0.62.
Powered by minismokebox version 0.40
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
PATH = /sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/home/cpan/bin
PERL5LIB = :/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/arch
PERL5_CPANPLUS_IS_RUNNING = 98334
PERL5_CPANPLUS_IS_VERSION = 0.9010
PERL5_MINISMOKEBOX = 0.40
PERL5_YACSMOKE_BASE = /usr/home/cpan/pit/rel/conf/perl-5.12.1
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /usr/local/bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /usr/home/cpan/pit/rel/perl-5.12.1/bin/perl
UID: $< = 1003
EUID: $> = 1003
GID: $( = 1003 1003 1003
EGID: $) = 1003 1003 1003
-------------------------------
--
Summary of my perl5 (revision 5 version 12 subversion 1) configuration:
Platform:
osname=freebsd, osvers=7.2-release, archname=i386-freebsd-thread-multi-64int
uname='freebsd wintermute.staffordshire.gov.uk 7.2-release freebsd 7.2-release #0: fri may 1 08:49:13 utc 2009 root@walker.cse.buffalo.edu:usrobjusrsrcsysgeneric i386 '
config_args='-des -Dprefix=/usr/home/cpan/pit/rel/perl-5.12.1 -Dusethreads -Duse64bitint'
hint=recommended, useposix=true, d_sigaction=define
useithreads=define, usemultiplicity=define
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=undef, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include',
optimize='-O',
cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.2.1 20070719 [FreeBSD]', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=4, prototype=define
Linker and Libraries:
ld='cc', ldflags ='-pthread -Wl,-E -fstack-protector -L/usr/local/lib'
libpth=/usr/lib /usr/local/lib
libs=-lgdbm -lm -lcrypt
perllibs=-lm -lcrypt
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
cccdlflags='-DPIC -fPIC', lddlflags='-shared -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: MULTIPLICITY PERL_DONT_CREATE_GVSV
PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP USE_64_BIT_INT
USE_ITHREADS USE_LARGE_FILES USE_PERLIO USE_PERL_ATOF
USE_REENTRANT_API
Built under freebsd
Compiled at May 21 2010 12:29:02
%ENV:
PERL5LIB=":/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/arch:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/lib:/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/arch"
PERL5_CPANPLUS_IS_RUNNING="98334"
PERL5_CPANPLUS_IS_VERSION="0.9010"
PERL5_MINISMOKEBOX="0.40"
PERL5_YACSMOKE_BASE="/usr/home/cpan/pit/rel/conf/perl-5.12.1"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-Hash-MultiValue-1.02/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Test-use-ok-0.02/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Tie-ToObject-0.03/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-1.12/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Hash-AutoHash-Args-1.12/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/IO-stringy-2.110/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Class-AutoClass-1.54/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/JSON-2.50/blib/arch
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/lib
/usr/home/cpan/pit/rel/conf/perl-5.12.1/.cpanplus/5.12.1/build/Data-Babel-Client-0.02/blib/arch
/usr/home/cpan/pit/rel/perl-5.12.1/lib/site_perl/5.12.1/i386-freebsd-thread-multi-64int
/usr/home/cpan/pit/rel/perl-5.12.1/lib/site_perl/5.12.1
/usr/home/cpan/pit/rel/perl-5.12.1/lib/5.12.1/i386-freebsd-thread-multi-64int
/usr/home/cpan/pit/rel/perl-5.12.1/lib/5.12.1
.