Report for Bio-Biblio-1.70

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From: metabase:user:322078bc-2aae-11df-837a-5e0a49663a4f
Subject: PASS Bio-Biblio-1.70 v5.8.9 OpenBSD
Date: 2013-03-29T18:18:55Z

This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--

Dear CDRAUG,

This is a computer-generated error report created automatically by
CPANPLUS, version 0.9134. Testers personal comments may appear
at the end of this report.


Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

TEST RESULTS:

Below is the error stack from stage 'make test':

PERL_DL_NONLAZY=1 /home/cpan/pit/thr/perl-5.8.9/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok
t/biofetch.t .............. ok
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing
All tests successful.
Files=10, Tests=609, 14 wallclock secs ( 0.11 usr  0.10 sys +  4.74 cusr  2.82 csys =  7.77 CPU)
Result: PASS


PREREQUISITES:

Here is a list of prerequisites you specified and versions we
managed to load:

	  Module Name                        Have     Want
	  Bio::Annotation::DBLink               0        0
	  Bio::DB::DBFetch                      0        0
	  Bio::Root::IO                         0        0
	  Bio::Root::Root                       0        0
	  Bio::Root::RootI                      0        0
	  Data::Dumper                   2.121_17        0
	  File::Find                         1.13        0
	  File::Spec                         3.40        0
	  File::Temp                         0.23        0
	  Getopt::Std                        1.06        0
	  LWP::Simple                        6.00        0
	  SOAP::Lite                        0.715        0
	  Symbol                             1.06        0
	  Test::More                         0.98        0
	  URI::Escape                        3.31        0
	  XML::Parser                        2.41        0
	  XML::Twig                          3.42        0
	  parent                            0.225        0
	  strict                             1.03        0
	  utf8                               1.07        0
	  vars                               1.01        0
	  warnings                        1.05_01        0

Perl module toolchain versions installed:
	Module Name                        Have
	CPANPLUS                         0.9134
	CPANPLUS::Dist::Build              0.70
	Cwd                                3.40
	ExtUtils::CBuilder             0.280205
	ExtUtils::Command                  1.16
	ExtUtils::Install                  1.54
	ExtUtils::MakeMaker                6.64
	ExtUtils::Manifest                 1.61
	ExtUtils::ParseXS                  3.18
	File::Spec                         3.40
	Module::Build                    0.4003
	Pod::Parser                        1.35
	Pod::Simple                           0
	Test::Harness                      3.26
	Test::More                         0.98
	version                          0.9902

******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender.  As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.

If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally.  We appreciate your patience. :)
**********************************************************************

Additional comments:


This report was machine-generated by CPANPLUS::Dist::YACSmoke 0.86.
Powered by minismokebox version 0.54

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    PATH = /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Bio-Biblio-1.70/blib/script:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/SOAP-Lite-0.715/blib/script:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/libwww-perl-6.05/blib/script:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/script:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/script:/home/cpan/bin:/bin:/sbin:/usr/bin:/usr/sbin:/usr/X11R6/bin:/usr/local/bin:/usr/local/sbin:/usr/games:.
    PERL5LIB = :/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-HTML-1.00/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-HTML-1.00/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/LWP-MediaTypes-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/LWP-MediaTypes-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/URI-1.60/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/URI-1.60/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Message-6.06/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Message-6.06/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Cookies-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Cookies-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Daemon-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Daemon-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Negotiate-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Negotiate-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Net-HTTP-6.06/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Net-HTTP-6.06/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/WWW-RobotRules-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/WWW-RobotRules-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/libwww-perl-6.05/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/libwww-perl-6.05/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Class-Inspector-1.28/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Class-Inspector-1.28/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Task-Weaken-1.04/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Task-Weaken-1.04/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Parser-2.41/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Parser-2.41/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/SOAP-Lite-0.715/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/SOAP-Lite-0.715/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Twig-3.42/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Twig-3.42/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/parent-0.225/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/parent-0.225/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Bio-Biblio-1.70/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Bio-Biblio-1.70/blib/arch
    PERL5_CPANPLUS_IS_RUNNING = 2324
    PERL5_CPANPLUS_IS_VERSION = 0.9134
    PERL5_MINISMOKEBOX = 0.54
    PERL5_YACSMOKE_BASE = /home/cpan/pit/thr/conf/perl-5.8.9
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_MM_USE_DEFAULT = 1
    SHELL = /usr/local/bin/bash
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    Perl: $^X = /home/cpan/pit/thr/perl-5.8.9/bin/perl
    UID:  $<  = 1001
    EUID: $>  = 1001
    GID:  $(  = 1001 1001
    EGID: $)  = 1001 1001


-------------------------------


--

Summary of my perl5 (revision 5 version 8 subversion 9) configuration:
  Platform:
    osname=openbsd, osvers=5.1, archname=OpenBSD.amd64-openbsd-thread-multi
    uname='openbsd oliphant.bingosnet.co.uk 5.1 generic#181 amd64 '
    config_args='-des -Dprefix=/home/cpan/pit/thr/perl-5.8.9 -Dusethreads'
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=define use64bitall=define uselongdouble=undef
    usemymalloc=y, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-pthread -fno-strict-aliasing -pipe -I/usr/local/include',
    optimize='-O2',
    cppflags='-pthread -fno-strict-aliasing -pipe -I/usr/local/include'
    ccversion='', gccversion='4.2.1 20070719 ', gccosandvers='openbsd5.1'
    intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
    ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=8, prototype=define
  Linker and Libraries:
    ld='cc', ldflags ='-pthread -Wl,-E  -L/usr/local/lib'
    libpth=/usr/local/lib /usr/lib
    libs=-lgdbm -lm -lutil -lc
    perllibs=-lm -lutil -lc
    libc=/usr/lib/libc.so.62.0, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
    cccdlflags='-DPIC -fPIC ', lddlflags='-shared -fPIC  -L/usr/local/lib'


Characteristics of this binary (from libperl): 
  Compile-time options: MULTIPLICITY MYMALLOC PERL_IMPLICIT_CONTEXT
                        PERL_MALLOC_WRAP USE_64_BIT_ALL USE_64_BIT_INT
                        USE_FAST_STDIO USE_ITHREADS USE_LARGE_FILES
                        USE_PERLIO USE_REENTRANT_API
  Built under openbsd
  Compiled at May  5 2012 02:16:14
  %ENV:
    PERL5LIB=":/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-HTML-1.00/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-HTML-1.00/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/LWP-MediaTypes-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/LWP-MediaTypes-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/URI-1.60/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/URI-1.60/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Message-6.06/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Message-6.06/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Cookies-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Cookies-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Daemon-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Daemon-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Negotiate-6.01/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Negotiate-6.01/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Net-HTTP-6.06/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Net-HTTP-6.06/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/WWW-RobotRules-6.02/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/WWW-RobotRules-6.02/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/libwww-perl-6.05/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/libwww-perl-6.05/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Class-Inspector-1.28/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Class-Inspector-1.28/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Task-Weaken-1.04/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Task-Weaken-1.04/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Parser-2.41/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Parser-2.41/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/SOAP-Lite-0.715/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/SOAP-Lite-0.715/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Twig-3.42/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/XML-Twig-3.42/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/parent-0.225/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/parent-0.225/blib/arch:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Bio-Biblio-1.70/blib/lib:/home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Bio-Biblio-1.70/blib/arch"
    PERL5_CPANPLUS_IS_RUNNING="2324"
    PERL5_CPANPLUS_IS_VERSION="0.9134"
    PERL5_MINISMOKEBOX="0.54"
    PERL5_YACSMOKE_BASE="/home/cpan/pit/thr/conf/perl-5.8.9"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_MM_USE_DEFAULT="1"
  @INC:
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/IO-String-1.08/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Data-Stag-0.11/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/BioPerl-1.6.901/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/Encode-Locale-1.03/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTTP-Date-6.02/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/File-Listing-6.04/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Tagset-3.20/blib/arch
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/lib
    /home/cpan/pit/thr/conf/perl-5.8.9/.cpanplus/5.8.9/build/HTML-Parser-3.70/blib/arch
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