Back
From: metabase:user:322078bc-2aae-11df-837a-5e0a49663a4f
Subject: FAIL BioX-SeqUtils-Promoter-0.1.1 v5.12.2 GNU/Linux
Date: 2011-09-10T22:27:59Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear CSTEPHENE,
This is a computer-generated error report created automatically by
CPANPLUS, version 0.9109. Testers personal comments may appear
at the end of this report.
Thank you for uploading your work to CPAN. However, it appears that
there were some problems testing your distribution.
TEST RESULTS:
Below is the error stack from stage 'make test':
[MSG] [Sat Sep 10 23:25:55 2011] Building BioX-SeqUtils-Promoter
[ERROR] [Sat Sep 10 23:25:55 2011] MAKE TEST failed:
# Failed test 'use BioX::SeqUtils::Promoter;'
# at t/00.load.t line 4.
# Tried to use 'BioX::SeqUtils::Promoter'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# Compilation failed in require at (eval 4) line 2.
# BEGIN failed--compilation aborted at (eval 4) line 2.
Use of uninitialized value $BioX::SeqUtils::Promoter::VERSION in concatenation (.) or string at t/00.load.t line 7.
# Testing BioX::SeqUtils::Promoter
# Looks like you failed 1 test of 1.
t/00.load.t .......
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/1 subtests
# Failed test 'use BioX::SeqUtils::Promoter::Base;'
# at t/10.length.t line 4.
# Tried to use 'BioX::SeqUtils::Promoter::Base'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
# Compilation failed in require at (eval 4) line 2.
# BEGIN failed--compilation aborted at (eval 4) line 2.
Can't locate object method "new" via package "BioX::SeqUtils::Promoter::Base" at t/10.length.t line 11.
# Looks like you planned 2 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/10.length.t .....
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 2/2 subtests
# Failed test 'use BioX::SeqUtils::Promoter;'
# at t/10.load.t line 4.
# Tried to use 'BioX::SeqUtils::Promoter'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# Compilation failed in require at (eval 4) line 2.
# BEGIN failed--compilation aborted at (eval 4) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Alignment;'
# at t/10.load.t line 10.
# Tried to use 'BioX::SeqUtils::Promoter::Alignment'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
# Compilation failed in require at (eval 7) line 2.
# ...propagated at /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/base.pm line 94.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Alignment.pm line 7.
# Compilation failed in require at (eval 5) line 2.
# BEGIN failed--compilation aborted at (eval 5) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Annotations;'
# at t/10.load.t line 16.
# Tried to use 'BioX::SeqUtils::Promoter::Annotations'.
# Error: Attempt to reload BioX/SeqUtils/Promoter/Base.pm aborted.
# Compilation failed in require at (eval 9) line 2.
# ...propagated at /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/base.pm line 94.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations.pm line 7.
# Compilation failed in require at (eval 8) line 2.
# BEGIN failed--compilation aborted at (eval 8) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Annotations::Base;'
# at t/10.load.t line 22.
# Tried to use 'BioX::SeqUtils::Promoter::Annotations::Base'.
# Error: Attempt to reload BioX/SeqUtils/Promoter/Base.pm aborted.
# Compilation failed in require at (eval 11) line 2.
# ...propagated at /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/base.pm line 94.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations/Base.pm line 7.
# Compilation failed in require at (eval 10) line 2.
# BEGIN failed--compilation aborted at (eval 10) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Annotations::CG;'
# at t/10.load.t line 28.
# Tried to use 'BioX::SeqUtils::Promoter::Annotations::CG'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations/CG.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations/CG.pm line 8.
# Compilation failed in require at (eval 12) line 2.
# BEGIN failed--compilation aborted at (eval 12) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Annotations::Consensus;'
# at t/10.load.t line 34.
# Tried to use 'BioX::SeqUtils::Promoter::Annotations::Consensus'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations/Consensus.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Annotations/Consensus.pm line 8.
# Compilation failed in require at (eval 13) line 2.
# BEGIN failed--compilation aborted at (eval 13) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Base;'
# at t/10.load.t line 40.
# Tried to use 'BioX::SeqUtils::Promoter::Base'.
# Error: Attempt to reload BioX/SeqUtils/Promoter/Base.pm aborted.
# Compilation failed in require at (eval 14) line 2.
# BEGIN failed--compilation aborted at (eval 14) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::SaveTypes;'
# at t/10.load.t line 46.
# Tried to use 'BioX::SeqUtils::Promoter::SaveTypes'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes.pm line 8.
# Compilation failed in require at (eval 15) line 2.
# BEGIN failed--compilation aborted at (eval 15) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::SaveTypes::Base;'
# at t/10.load.t line 52.
# Tried to use 'BioX::SeqUtils::Promoter::SaveTypes::Base'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/Base.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/Base.pm line 8.
# Compilation failed in require at (eval 16) line 2.
# BEGIN failed--compilation aborted at (eval 16) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::SaveTypes::RImage;'
# at t/10.load.t line 58.
# Tried to use 'BioX::SeqUtils::Promoter::SaveTypes::RImage'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/RImage.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/RImage.pm line 8.
# Compilation failed in require at (eval 17) line 2.
# BEGIN failed--compilation aborted at (eval 17) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::SaveTypes::Text;'
# at t/10.load.t line 64.
# Tried to use 'BioX::SeqUtils::Promoter::SaveTypes::Text'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/Text.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/SaveTypes/Text.pm line 8.
# Compilation failed in require at (eval 18) line 2.
# BEGIN failed--compilation aborted at (eval 18) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Sequence;'
# at t/10.load.t line 71.
# Tried to use 'BioX::SeqUtils::Promoter::Sequence'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Sequence.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Sequence.pm line 8.
# Compilation failed in require at (eval 19) line 2.
# BEGIN failed--compilation aborted at (eval 19) line 2.
# Failed test 'use BioX::SeqUtils::Promoter::Sequences;'
# at t/10.load.t line 77.
# Tried to use 'BioX::SeqUtils::Promoter::Sequences'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Sequences.pm line 8.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Sequences.pm line 8.
# Compilation failed in require at (eval 20) line 2.
# BEGIN failed--compilation aborted at (eval 20) line 2.
Use of uninitialized value $BioX::SeqUtils::Promoter::VERSION in concatenation (.) or string at t/10.load.t line 7.
# Testing BioX::SeqUtils::Promoter
Use of uninitialized value $BioX::SeqUtils::Promoter::Alignment::VERSION in concatenation (.) or string at t/10.load.t line 13.
# Testing BioX::SeqUtils::Promoter::Alignment
Use of uninitialized value $BioX::SeqUtils::Promoter::Annotations::VERSION in concatenation (.) or string at t/10.load.t line 19.
# Testing BioX::SeqUtils::Promoter::Annotations
# Testing BioX::SeqUtils::Promoter::Annotations::Base -1, set by base.pm
Use of uninitialized value $BioX::SeqUtils::Promoter::Annotations::CG::VERSION in concatenation (.) or string at t/10.load.t line 31.
# Testing BioX::SeqUtils::Promoter::Annotations::CG
Use of uninitialized value $BioX::SeqUtils::Promoter::Annotations::Consensus::VERSION in concatenation (.) or string at t/10.load.t line 37.
# Testing BioX::SeqUtils::Promoter::Annotations::Consensus
# Testing BioX::SeqUtils::Promoter::Base -1, set by base.pm
Use of uninitialized value $BioX::SeqUtils::Promoter::SaveTypes::VERSION in concatenation (.) or string at t/10.load.t line 49.
# Testing BioX::SeqUtils::Promoter::SaveTypes
# Testing BioX::SeqUtils::Promoter::SaveTypes::Base -1, set by base.pm
Use of uninitialized value $BioX::SeqUtils::Promoter::SaveTypes::RImage::VERSION in concatenation (.) or string at t/10.load.t line 61.
# Testing BioX::SeqUtils::Promoter::SaveTypes::RImage
Use of uninitialized value $BioX::SeqUtils::Promoter::SaveTypes::Text::VERSION in concatenation (.) or string at t/10.load.t line 67.
# Testing BioX::SeqUtils::Promoter::SaveTypes::Text
Use of uninitialized value $BioX::SeqUtils::Promoter::Sequence::VERSION in concatenation (.) or string at t/10.load.t line 74.
# Testing BioX::SeqUtils::Promoter::Sequence
Use of uninitialized value $BioX::SeqUtils::Promoter::Sequences::VERSION in concatenation (.) or string at t/10.load.t line 80.
# Testing BioX::SeqUtils::Promoter::Sequences
# Looks like you failed 13 tests of 13.
t/10.load.t .......
Dubious, test returned 13 (wstat 3328, 0xd00)
Failed 13/13 subtests
# Failed test 'use BioX::SeqUtils::Promoter;'
# at t/10.sequence.t line 4.
# Tried to use 'BioX::SeqUtils::Promoter'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# Compilation failed in require at (eval 4) line 2.
# BEGIN failed--compilation aborted at (eval 4) line 2.
Attempt to reload BioX/SeqUtils/Promoter.pm aborted.
Compilation failed in require at t/10.sequence.t line 7.
BEGIN failed--compilation aborted at t/10.sequence.t line 7.
# Looks like you planned 3 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/10.sequence.t ...
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 3/3 subtests
Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Base.pm line 7.
Compilation failed in require at (eval 5) line 2.
...propagated at /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/base.pm line 94.
BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter/Sequences.pm line 7.
Compilation failed in require at t/10.sequences.t line 3.
BEGIN failed--compilation aborted at t/10.sequences.t line 3.
# Looks like your test exited with 2 before it could output anything.
t/10.sequences.t ..
Dubious, test returned 2 (wstat 512, 0x200)
Failed 2/2 subtests
# Failed test 'use BioX::SeqUtils::Promoter;'
# at t/11.new.t line 4.
# Tried to use 'BioX::SeqUtils::Promoter'.
# Error: Can't locate Class/Std.pm in @INC (@INC contains: /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2 /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux /home/cpan/pit/bare/perl-5.12.2/lib/5.12.2 .) at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib/BioX/SeqUtils/Promoter.pm line 10.
# Compilation failed in require at (eval 4) line 2.
# BEGIN failed--compilation aborted at (eval 4) line 2.
Attempt to reload BioX/SeqUtils/Promoter.pm aborted.
Compilation failed in require at t/11.new.t line 7.
BEGIN failed--compilation aborted at t/11.new.t line 7.
# Looks like you planned 2 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/11.new.t ........
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 2/2 subtests
Test Summary Report
-------------------
t/00.load.t (Wstat: 256 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 1
t/10.length.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 2 tests but ran 1.
t/10.load.t (Wstat: 3328 Tests: 13 Failed: 13)
Failed tests: 1-13
Non-zero exit status: 13
t/10.sequence.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 3 tests but ran 1.
t/10.sequences.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 2 tests but ran 0.
t/11.new.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 2 tests but ran 1.
Files=6, Tests=17, 0 wallclock secs ( 0.03 usr 0.02 sys + 0.10 cusr 0.02 csys = 0.17 CPU)
Result: FAIL
Failed 6/6 test programs. 17/17 subtests failed.
BEGIN failed--compilation aborted at /home/cpan/pit/bare/perl-5.12.2/bin/cpanp-run-perl line 8.
[MSG] [Sat Sep 10 23:25:55 2011] DEFAULT 'proceed_on_test_failure' HANDLER RETURNING 'sub return value'
MISSING PREREQUISITES:
It was observed that the test suite seem to fail without these modules:
Class::Std
As such, adding the prerequisite module(s) to 'PREREQ_PM' in your
Makefile.PL should solve this problem. For example:
WriteMakefile(
AUTHOR => 'CSTEPHENE (cpanplus-info@lists.sf.net)',
... # other information
PREREQ_PM => {
'Class::Std' => '0', # or a minimum working version
}
);
Thanks! :-)
PREREQUISITES:
Here is a list of prerequisites you specified and versions we
managed to load:
Module Name Have Want
Test::More 0.98 0
version 0.94 0
Perl module toolchain versions installed:
Module Name Have
CPANPLUS 0.9109
CPANPLUS::Dist::Build 0.56
Cwd 3.33
ExtUtils::CBuilder 0.280202
ExtUtils::Command 1.16
ExtUtils::Install 1.55
ExtUtils::MakeMaker 6.59
ExtUtils::Manifest 1.60
ExtUtils::ParseXS 3.03
File::Spec 3.33
Module::Build 0.3800
Test::Harness 3.23
Test::More 0.98
version 0.94
******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender. As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.
If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally. We appreciate your patience. :)
**********************************************************************
Additional comments:
This report was machine-generated by CPANPLUS::Dist::YACSmoke 0.64.
Powered by minismokebox version 0.54
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US
LC_COLLATE = C
PATH = /usr/local/bin:/usr/bin:/bin:/usr/games:/usr/lib64/java/bin:/usr/lib64/qt/bin:/usr/share/texmf/bin:.
PERL5LIB = :/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib:/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch
PERL5_CPANPLUS_IS_RUNNING = 13337
PERL5_CPANPLUS_IS_VERSION = 0.9109
PERL5_MINISMOKEBOX = 0.54
PERL5_YACSMOKE_BASE = /home/cpan/pit/bare/conf/perl-5.12.2
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /home/cpan/pit/bare/perl-5.12.2/bin/perl
UID: $< = 1001
EUID: $> = 1001
GID: $( = 100 100
EGID: $) = 100 100
-------------------------------
--
Summary of my perl5 (revision 5 version 12 subversion 2) configuration:
Platform:
osname=linux, osvers=2.6.33.4, archname=x86_64-linux
uname='linux slack64 2.6.33.4 #3 smp wed may 12 23:13:09 cdt 2010 x86_64 intel(r) xeon(r) cpu e5520 @ 2.27ghz genuineintel gnulinux '
config_args='-des -Dprefix=/home/cpan/pit/bare/perl-5.12.2'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.4.4', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib /usr/lib /lib64 /usr/lib64 /usr/local/lib64
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.11.1'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: PERL_DONT_CREATE_GVSV PERL_MALLOC_WRAP USE_64_BIT_ALL
USE_64_BIT_INT USE_LARGE_FILES USE_PERLIO
USE_PERL_ATOF
Built under linux
Compiled at Feb 15 2011 14:46:52
%ENV:
PERL5LIB=":/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib:/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch"
PERL5_CPANPLUS_IS_RUNNING="13337"
PERL5_CPANPLUS_IS_VERSION="0.9109"
PERL5_MINISMOKEBOX="0.54"
PERL5_YACSMOKE_BASE="/home/cpan/pit/bare/conf/perl-5.12.2"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/lib
/home/cpan/pit/bare/conf/perl-5.12.2/.cpanplus/5.12.2/build/BioX-SeqUtils-Promoter/blib/arch
/home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2/x86_64-linux
/home/cpan/pit/bare/perl-5.12.2/lib/site_perl/5.12.2
/home/cpan/pit/bare/perl-5.12.2/lib/5.12.2/x86_64-linux
/home/cpan/pit/bare/perl-5.12.2/lib/5.12.2
.