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From: metabase:user:3198cbe2-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Bio-PrimerDesigner-0.02 v5.18.0 GNU/Linux
Date: 2014-01-12T22:37:52Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Sheldon McKay,
This is a computer-generated report for Bio-PrimerDesigner-0.02
on perl 5.18.0, created by CPAN-Reporter-1.2010.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 /home/graham/perls/perl5.18.0-thread/bin/perl "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
# Failed test 'use Bio::PrimerDesigner;'
# at t/epcr.t line 12.
# Tried to use 'Bio::PrimerDesigner'.
# Error: Can't locate Bio/PrimerDesigner.pm in @INC (you may need to install the Bio::PrimerDesigner module) (@INC contains: /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/lib /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/arch /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0 /home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/5.18.0 .) at t/epcr.t line 12.
# BEGIN failed--compilation aborted at t/epcr.t line 12.
Can't locate object method "new" via package "Bio::PrimerDesigner" (perhaps you forgot to load "Bio::PrimerDesigner"?) at t/epcr.t line 14.
# Looks like you planned 8 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/epcr.t .............
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 8/8 subtests
# Failed test 'use Bio::PrimerDesigner;'
# at t/primer3.t line 12.
# Tried to use 'Bio::PrimerDesigner'.
# Error: Can't locate Bio/PrimerDesigner.pm in @INC (you may need to install the Bio::PrimerDesigner module) (@INC contains: /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/lib /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/arch /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0 /home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/5.18.0 .) at t/primer3.t line 12.
# BEGIN failed--compilation aborted at t/primer3.t line 12.
Can't locate object method "new" via package "Bio::PrimerDesigner" (perhaps you forgot to load "Bio::PrimerDesigner"?) at t/primer3.t line 14.
# Looks like you planned 7 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/primer3.t ..........
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 7/7 subtests
# Failed test 'use Bio::PrimerDesigner;'
# at t/primer_designer.t line 21.
# Tried to use 'Bio::PrimerDesigner'.
# Error: Can't locate Bio/PrimerDesigner.pm in @INC (you may need to install the Bio::PrimerDesigner module) (@INC contains: /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/lib /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/arch /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0 /home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/5.18.0 .) at t/primer_designer.t line 21.
# BEGIN failed--compilation aborted at t/primer_designer.t line 21.
Can't locate object method "new" via package "Bio::PrimerDesigner" (perhaps you forgot to load "Bio::PrimerDesigner"?) at t/primer_designer.t line 23.
# Looks like you planned 22 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/primer_designer.t ..
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 22/22 subtests
# Failed test 'Call to remote server'
# at t/remote.t line 20.
# Looks like you failed 1 test of 5.
t/remote.t ...........
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/5 subtests
# Failed test 'use Bio::PrimerDesigner;'
# at t/result.t line 12.
# Tried to use 'Bio::PrimerDesigner'.
# Error: Can't locate Bio/PrimerDesigner.pm in @INC (you may need to install the Bio::PrimerDesigner module) (@INC contains: /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/lib /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/arch /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0 /home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/5.18.0 .) at t/result.t line 12.
# BEGIN failed--compilation aborted at t/result.t line 12.
Can't locate object method "new" via package "Bio::PrimerDesigner" (perhaps you forgot to load "Bio::PrimerDesigner"?) at t/result.t line 14.
# Looks like you planned 3 tests but ran 1.
# Looks like you failed 1 test of 1 run.
# Looks like your test exited with 255 just after 1.
t/result.t ...........
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 3/3 subtests
Can't locate Bio/PrimerDesigner.pm in @INC (you may need to install the Bio::PrimerDesigner module) (@INC contains: /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/lib /home/graham/perls/caches/perl-5.18.0-thread/build/Bio-PrimerDesigner-0.02-Q65HvU/blib/arch /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0 /home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi /home/graham/perls/perl5.18.0-thread/lib/5.18.0 .) at t/tables.t line 11.
BEGIN failed--compilation aborted at t/tables.t line 11.
# Looks like your test exited with 2 before it could output anything.
t/tables.t ...........
Dubious, test returned 2 (wstat 512, 0x200)
Failed 10/10 subtests
Test Summary Report
-------------------
t/epcr.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 8 tests but ran 1.
t/primer3.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 7 tests but ran 1.
t/primer_designer.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 22 tests but ran 1.
t/remote.t (Wstat: 256 Tests: 5 Failed: 1)
Failed test: 5
Non-zero exit status: 1
t/result.t (Wstat: 65280 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 255
Parse errors: Bad plan. You planned 3 tests but ran 1.
t/tables.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 10 tests but ran 0.
Files=6, Tests=9, 181 wallclock secs ( 0.05 usr 0.00 sys + 0.23 cusr 0.04 csys = 0.32 CPU)
Result: FAIL
Failed 6/6 test programs. 5/9 subtests failed.
Makefile:912: recipe for target 'test_dynamic' failed
make: *** [test_dynamic] Error 2
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ---- --------
Class::Base 0 0.05
HTTP::Request 0 6.00
HTTP::Response 0 6.04
LWP::UserAgent 0 6.05
Test::More 0 1.001002
build_requires:
Module Need Have
------------------- ---- --------
ExtUtils::MakeMaker 0 6.87_01
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.UTF-8
LC_ADDRESS = en_GB.UTF-8
LC_COLLATE = en_GB.UTF-8
LC_CTYPE = en_GB.UTF-8
LC_IDENTIFICATION = en_GB.UTF-8
LC_MEASUREMENT = en_GB.UTF-8
LC_MESSAGES = en_GB.UTF-8
LC_MONETARY = en_GB.UTF-8
LC_NAME = en_GB.UTF-8
LC_NUMERIC = en_GB.UTF-8
LC_PAPER = en_GB.UTF-8
LC_TELEPHONE = en_GB.UTF-8
LC_TIME = en_GB.UTF-8
PATH = /home/graham/perls/perl5.18.0-thread/bin:/usr/local/sbin:/usr/local/bin:/usr/bin:/usr/bin/core_perl
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 2062
PERL5_CPAN_IS_RUNNING = 2062
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 471,2062
PERL_CR_SMOKER_CURRENT = Bio-PrimerDesigner-0.02
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = xterm
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/graham/perls/perl5.18.0-thread/bin/perl
$UID/$EUID = 1000 / 1000
$GID = 100 10 100
$EGID = 100 10 100
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 1.9402
CPAN::Meta 2.133380
Cwd 3.40
ExtUtils::CBuilder 0.280212
ExtUtils::Command 1.18
ExtUtils::Install 1.59
ExtUtils::MakeMaker 6.87_01
ExtUtils::Manifest 1.63
ExtUtils::ParseXS 3.22
File::Spec 3.40
JSON 2.90
JSON::PP 2.27203
Module::Build 0.4003
Module::Signature n/a
Parse::CPAN::Meta 1.4409
Test::Harness 3.30
Test::More 1.001002
YAML 0.88
YAML::Syck 1.27
version 0.9906
--
Summary of my perl5 (revision 5 version 18 subversion 0) configuration:
Platform:
osname=linux, osvers=3.11.6-1-arch, archname=x86_64-linux-thread-multi
uname='linux arch002 3.11.6-1-arch #1 smp preempt fri oct 18 23:22:36 cest 2013 x86_64 gnulinux '
config_args=''
hint=recommended, useposix=true, d_sigaction=define
useithreads=define, usemultiplicity=define
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.8.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib/../lib /usr/lib/../lib /lib /usr/lib /lib64 /usr/lib64
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
libc=/lib/libc-2.18.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.18'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV PERL_SAWAMPERSAND USE_64_BIT_ALL
USE_64_BIT_INT USE_ITHREADS USE_LARGE_FILES
USE_LOCALE USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
USE_REENTRANT_API
Built under linux
Compiled at Dec 6 2013 08:54:47
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="2062"
PERL5_CPAN_IS_RUNNING="2062"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="471,2062"
PERL_CR_SMOKER_CURRENT="Bio-PrimerDesigner-0.02"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0/x86_64-linux-thread-multi
/home/graham/perls/perl5.18.0-thread/lib/site_perl/5.18.0
/home/graham/perls/perl5.18.0-thread/lib/5.18.0/x86_64-linux-thread-multi
/home/graham/perls/perl5.18.0-thread/lib/5.18.0
.