Bio-Biblio v1.70 Perl 5 v5.22.3 x86_64-linux-ld

Status
Pass
From
Andreas J. König (ANDK)
Dist
Bio-Biblio v1.70
Platform
Perl 5 v5.22.3 x86_64-linux-ld
Date
2017-10-17 09:19:04
ID
383eef2c-b31c-11e7-9895-4d88b3c1378e
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear carandraug,

This is a computer-generated report for Bio-Biblio-1.70
on perl 5.22.3, created by CPAN-Reporter-1.2018.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 "/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok
t/biofetch.t .............. ok
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing
All tests successful.
Files=10, Tests=609, 29 wallclock secs ( 0.08 usr  0.05 sys +  3.86 cusr  1.28 csys =  5.27 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                  Need Have    
    ----------------------- ---- --------
    Bio::Annotation::DBLink 0    0       
    Bio::DB::DBFetch        0    0       
    Bio::Root::IO           0    0       
    Bio::Root::Root         0    1.007002
    Bio::Root::RootI        0    0       
    Data::Dumper            0    2.161   
    Getopt::Std             0    1.11    
    LWP::Simple             0    6.27    
    parent                  0    0.232   
    SOAP::Lite              0    1.22    
    strict                  0    1.09    
    Symbol                  0    1.07    
    URI::Escape             0    3.31    
    utf8                    0    1.17    
    vars                    0    1.03    
    warnings                0    1.34    
    XML::Parser             0    2.44    
    XML::Twig               0    3.52    

build_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    File::Find              0    1.29    
    File::Spec              0    3.62    
    File::Temp              0    0.2304  
    Test::More              0    1.302103

configure_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    ExtUtils::MakeMaker     6.30 7.30    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = en_US.UTF-8
    PATH = /home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
    PERL5LIB = /tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 7468
    PERL5_CPAN_IS_RUNNING = 7468
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 1256,7468
    PERL_CANARY_STABILITY_NOPROMPT = 1
    PERL_MM_USE_DEFAULT = 1
    PERL_USE_UNSAFE_INC = 1
    SHELL = /usr/bin/zsh
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/bin/perl
    $UID/$EUID = 1005 / 1005
    $GID = 1005 1005
    $EGID = 1005 1005

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.18    
    CPAN::Meta          2.150010
    Cwd                 3.62    
    ExtUtils::CBuilder  0.280226
    ExtUtils::Command   7.30    
    ExtUtils::Install   2.06    
    ExtUtils::MakeMaker 7.30    
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.35    
    File::Spec          3.62    
    JSON                2.94    
    JSON::PP            2.94    
    Module::Build       0.4224  
    Module::Signature   0.81    
    Parse::CPAN::Meta   2.150010
    Test::Harness       3.39    
    Test::More          1.302103
    YAML                1.23    
    YAML::Syck          1.30    
    version             0.9909  


--

Summary of my perl5 (revision 5 version 22 subversion 3) configuration:
  Derived from: 16b638b0a20de774856b3a21a75a5e373af5262c
  Platform:
    osname=linux, osvers=4.12.0-2-amd64, archname=x86_64-linux-ld
    uname='linux k93msid 4.12.0-2-amd64 #1 smp debian 4.12.13-1 (2017-09-19) x86_64 gnulinux '
    config_args='-Dprefix=/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29 -Dmyhostname=k93msid -Dinstallusrbinperl=n -Uversiononly -Dusedevel -des -Ui_db -Dlibswanted=cl pthread socket inet nsl gdbm dbm malloc dl ld sun m crypt sec util c cposix posix ucb BSD gdbm_compat -Uuseithreads -Duselongdouble -DDEBUGGING=both'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=undef, usemultiplicity=undef
    use64bitint=define, use64bitall=define, uselongdouble=define
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-O2 -g',
    cppflags='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
    ccversion='', gccversion='7.2.0', gccosandvers=''
    intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678, doublekind=3
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16, longdblkind=3
    ivtype='long', ivsize=8, nvtype='long double', nvsize=16, Off_t='off_t', lseeksize=8
    alignbytes=16, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -fstack-protector-strong -L/usr/local/lib'
    libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/7/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
    libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
    perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
    libc=libc-2.24.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.24'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fPIC', lddlflags='-shared -O2 -g -L/usr/local/lib -fstack-protector-strong'


Characteristics of this binary (from libperl): 
  Compile-time options: DEBUGGING HAS_TIMES PERLIO_LAYERS
                        PERL_DONT_CREATE_GVSV
                        PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
                        PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
                        PERL_USE_DEVEL USE_64_BIT_ALL USE_64_BIT_INT
                        USE_LARGE_FILES USE_LOCALE USE_LOCALE_COLLATE
                        USE_LOCALE_CTYPE USE_LOCALE_NUMERIC USE_LOCALE_TIME
                        USE_LONG_DOUBLE USE_PERLIO USE_PERL_ATOF
  Locally applied patches:
	uncommitted-changes
  Built under linux
  Compiled at Oct  3 2017 17:52:32
  %ENV:
    PERL5LIB="/tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/lib:/tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/arch:/tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/lib"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="7468"
    PERL5_CPAN_IS_RUNNING="7468"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="1256,7468"
    PERL_CANARY_STABILITY_NOPROMPT="1"
    PERL_MM_USE_DEFAULT="1"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    /tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/SOAP-Lite-1.22-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-Parser-Lite-0.721-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/IO-SessionData-1.03-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/BioPerl-1.007002-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-Simple-2.24-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-SAX-Expat-0.51-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-XPath-0.14-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-XPathEngine-0.14-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-DOM-1.46-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/XML-RegExp-0.04-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/libxml-perl-0.08-0/blib/lib
    /tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/arch
    /tmp/loop_over_bdir-7467-MVTZbK/Data-Stag-0.14-0/blib/lib
    /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/lib/site_perl/5.22.3/x86_64-linux-ld
    /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/lib/site_perl/5.22.3
    /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/lib/5.22.3/x86_64-linux-ld
    /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.22.3/0a29/lib/5.22.3
    .