BioPerl v1.007002 Perl 5 v5.24.2 aarch64-linux-thread-multi
- Status
- Pass
- From
- Nigel Horne
- Dist
-
BioPerl v1.007002
- Platform
- Perl 5 v5.24.2 aarch64-linux-thread-multi
- Date
- 2018-01-10 13:14:52
- ID
- 3e77d7b2-f608-11e7-a9dd-c89c9ab1d982
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Christopher Fields,
This is a computer-generated report for BioPerl-1.007002
on perl 5.24.2, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
t/Align/Graphics.t ..................... skipped: The optional module GD (or dependencies thereof) was not installed
t/Align/AlignUtil.t .................... ok
t/Align/AlignStats.t ................... ok
t/Align/SimpleAlign.t .................. ok
t/Align/TreeBuild.t .................... ok
t/Align/Utilities.t .................... ok
t/AlignIO/clustalw.t ................... ok
t/AlignIO/bl2seq.t ..................... ok
t/AlignIO/arp.t ........................ ok
t/AlignIO/AlignIO.t .................... ok
t/AlignIO/emboss.t ..................... ok
t/AlignIO/fasta.t ...................... ok
t/AlignIO/largemultifasta.t ............ ok
t/AlignIO/maf.t ........................ ok
t/AlignIO/mase.t ....................... ok
t/AlignIO/mega.t ....................... ok
t/AlignIO/meme.t ....................... ok
t/AlignIO/metafasta.t .................. ok
t/AlignIO/nexml.t ...................... skipped: The optional module Bio::Phylo (or dependencies thereof) was not installed
t/AlignIO/msf.t ........................ ok
t/AlignIO/pfam.t ....................... ok
t/AlignIO/phylip.t ..................... ok
t/AlignIO/nexus.t ...................... ok
t/AlignIO/po.t ......................... ok
t/AlignIO/prodom.t ..................... ok
t/AlignIO/psi.t ........................ ok
t/AlignIO/selex.t ...................... ok
t/AlignIO/xmfa.t ....................... ok
t/Alphabet.t ........................... ok
t/AlignIO/stockholm.t .................. ok
t/Annotation/AnnotationAdaptor.t ....... ok
t/Assembly/IO/bowtie.t ................. skipped: The optional module Bio::DB::Sam (or dependencies thereof) was not installed
t/Annotation/Annotation.t .............. ok
Possible precedence issue with control flow operator at Bio/DB/IndexedBase.pm line 845, <GEN0> line 20.
t/Assembly/IO/sam.t .................... skipped: The optional module Bio::DB::Sam (or dependencies thereof) was not installed
t/Cluster/UniGene.t .................... ok
Possible precedence issue with control flow operator at Bio/DB/IndexedBase.pm line 845.
t/ClusterIO/ClusterIO.t ................ ok
t/ClusterIO/SequenceFamily.t ........... ok
t/ClusterIO/unigene.t .................. ok
t/Draw/Pictogram.t ..................... skipped: The optional module SVG (or dependencies thereof) was not installed
t/LiveSeq/Chain.t ...................... ok
t/LiveSeq/Mutation.t ................... ok
t/Assembly/ContigSpectrum.t ............ ok
t/LiveSeq/LiveSeq.t .................... ok
Possible precedence issue with control flow operator at Bio/DB/IndexedBase.pm line 845.
You are loading a Bio::DB::GFF database with GFF3 formatted data.
While this will likely work fine, the Bio::DB::GFF schema does not
always faithfully capture the complexity represented in GFF3 files.
Unless you have a specific reason for using Bio::DB::GFF, we suggest
that you use a Bio::DB::SeqFeature::Store database and its corresponding
loader, bp_seqfeature_load.pl.
Subroutine Bio::DB::IndexedBase::_strip_crnl redefined at Bio/DB/IndexedBase.pm line 304.
t/LocalDB/BioDBGFF.t ................... ok
t/LocalDB/Fasta.t ...................... ok
t/LocalDB/Flat.t ....................... ok
t/LocalDB/Index/Blast.t ................ ok
t/LiveSeq/Mutator.t .................... ok
Possible precedence issue with control flow operator at Bio/DB/IndexedBase.pm line 845.
Subroutine Bio::DB::IndexedBase::_strip_crnl redefined at Bio/DB/IndexedBase.pm line 304.
t/LocalDB/Qual.t ....................... ok
t/LocalDB/Index/BlastTable.t ........... ok
t/LocalDB/Index/Index.t ................ ok
t/Assembly/core.t ...................... ok
Possible precedence issue with control flow operator at Bio/DB/IndexedBase.pm line 845.
Subroutine Bio::DB::IndexedBase::_strip_crnl redefined at Bio/DB/IndexedBase.pm line 304.
t/LocalDB/Taxonomy/greengenes.t ........ ok
t/LocalDB/Registry.t ................... ok
t/LocalDB/Taxonomy/silva.t ............. ok
t/LocalDB/SeqFeature.t ................. ok
t/Map/Linkage.t ........................ ok
t/Map/Cyto.t ........................... ok
t/Map/MapIO.t .......................... ok
t/LocalDB/Taxonomy/sqlite.t ............ ok
t/Map/MicrosatelliteMarker.t ........... ok
t/Map/Map.t ............................ ok
t/Map/Physical.t ....................... ok
t/Matrix/IO/masta.t .................... ok
t/Matrix/IO/psm.t ...................... ok
t/Matrix/InstanceSite.t ................ ok
t/Matrix/Matrix.t ...................... ok
t/Matrix/ProtMatrix.t .................. ok
t/Matrix/ProtPsm.t ..................... ok
t/Matrix/SiteMatrix.t .................. ok
t/Ontology/GOterm.t .................... ok
t/Ontology/GraphAdaptor.t .............. ok
t/LocalDB/transfac_pro.t ............... ok
t/Ontology/IO/go.t ..................... ok
t/Ontology/IO/interpro.t ............... skipped: The optional module XML::Parser::PerlSAX (or dependencies thereof) was not installed
t/Ontology/OntologyEngine.t ............ ok
t/Ontology/Ontology.t .................. ok
t/Ontology/OntologyStore.t ............. skipped: Network tests have not been requested
t/Ontology/Relationship.t .............. ok
t/Ontology/RelationshipType.t .......... ok
t/Ontology/Term.t ...................... ok
t/Phenotype/Correlate.t ................ ok
t/Phenotype/MeSH.t ..................... ok
t/Phenotype/Measure.t .................. ok
t/Ontology/IO/obo.t .................... ok
t/Phenotype/MiniMIMentry.t ............. ok
t/Perl.t ............................... ok
t/Phenotype/OMIMentry.t ................ ok
t/Phenotype/OMIMentryAllelicVariant.t .. ok
t/Phenotype/Phenotype.t ................ ok
t/Phenotype/OMIMparser.t ............... ok
t/PopGen/Coalescent.t .................. ok
t/PopGen/HtSNP.t ....................... ok
t/PopGen/PopGenSims.t .................. ok
t/PopGen/TagHaplotype.t ................ ok
t/RemoteDB/BioFetch.t .................. skipped: Network tests have not been requested
t/PopGen/MK.t .......................... ok
t/RemoteDB/CUTG.t ...................... ok
t/RemoteDB/EntrezGene.t ................ skipped: The optional module Bio::ASN1::EntrezGene (or dependencies thereof) was not installed
t/RemoteDB/EMBL.t ...................... skipped: Network tests have not been requested
t/RemoteDB/GenBank.t ................... skipped: Network tests have not been requested
t/RemoteDB/GenPept.t ................... skipped: Network tests have not been requested
t/RemoteDB/HIV/HIV.t ................... skipped: The optional module XML::Simple (or dependencies thereof) was not installed
t/RemoteDB/HIV/HIVAnnotProcessor.t ..... ok
t/RemoteDB/HIV/HIVQuery.t .............. skipped: The optional module XML::Simple (or dependencies thereof) was not installed
t/RemoteDB/HIV/HIVQueryHelper.t ........ skipped: The optional module XML::Simple (or dependencies thereof) was not installed
t/RemoteDB/MeSH.t ...................... skipped: Network tests have not been requested
t/RemoteDB/Query/GenBank.t ............. skipped: Network tests have not been requested
t/RemoteDB/RefSeq.t .................... ok
t/RemoteDB/SeqRead_fail.t .............. skipped: Network tests have not been requested
t/RemoteDB/SeqVersion.t ................ skipped: The optional module HTML::TableExtract (or dependencies thereof) was not installed
t/RemoteDB/Taxonomy.t .................. skipped: The optional module XML::Twig (or dependencies thereof) was not installed
t/RemoteDB/SwissProt.t ................. skipped: Network tests have not been requested
t/PopGen/PopGen.t ...................... ok
t/Restriction/Analysis.t ............... ok
t/Restriction/Gel.t .................... ok
t/Root/Exception.t ..................... ok
t/Root/HTTPget.t ....................... skipped: Network tests have not been requested
t/Restriction/IO.t ..................... ok
t/Root/IO.t ............................ ok
t/Root/RootI.t ......................... ok
t/Root/Storable.t ...................... ok
t/Root/RootIO.t ........................ skipped: Network tests have not been requested
t/SearchDist.t ......................... skipped: The optional module Bio::Ext::Align (or dependencies thereof) was not installed
t/Root/Utilities.t ..................... ok
t/SearchIO/SearchIO.t .................. ok
t/SearchIO/CigarString.t ............... ok
t/PodSyntax.t .......................... ok
t/SearchIO/SimilarityPair.t ............ ok
t/SearchIO/Writer/GbrowseGFF.t ......... ok
t/Restriction/Analysis-refac.t ......... ok
t/SearchIO/Writer/HSPTableWriter.t ..... ok
t/SearchIO/Writer/HTMLWriter.t ......... ok
t/SearchIO/Writer/HitTableWriter.t ..... ok
t/SearchIO/Writer/TextWriter.t ......... ok
t/SearchIO/axt.t ....................... ok
t/SearchIO/blasttable.t ................ ok
t/SearchIO/blast_pull.t ................ ok
t/SearchIO/cross_match.t ............... ok
t/SearchIO/erpin.t ..................... ok
t/SearchIO/exonerate.t ................. ok
t/SearchIO/Tiling.t .................... ok
t/SearchIO/fasta.t ..................... ok
t/SearchIO/hmmer_pull.t ................ ok
t/SearchIO/infernal.t .................. ok
t/SearchIO/megablast.t ................. ok
t/SearchIO/psl.t ....................... ok
t/SearchIO/rnamotif.t .................. ok
t/SearchIO/blast.t ..................... ok
t/SearchIO/waba.t ...................... ok
t/SearchIO/sim4.t ...................... ok
t/SearchIO/gmap_f9.t ................... ok
t/Seq/EncodedSeq.t ..................... ok
t/SearchIO/wise.t ...................... ok
t/Seq/DBLink.t ......................... ok
t/Seq/LargeLocatableSeq.t .............. ok
t/Seq/LargePSeq.t ...................... ok
t/Seq/LocatableSeq.t ................... ok
t/Seq/MetaSeq.t ........................ ok
t/Seq/PrimaryQual.t .................... ok
t/SearchIO/hmmer.t ..................... ok
t/Seq/PrimedSeq.t ...................... ok
t/Seq/PrimarySeq.t ..................... ok
t/Seq/WithQuality.t .................... ok
t/Seq/Seq.t ............................ ok
t/Seq/SimulatedRead.t .................. ok
t/SeqEvolution.t ....................... ok
t/SeqFeature/Amplicon.t ................ ok
t/SeqFeature/Clone.t ................... ok
t/Seq/Quality.t ........................ ok
t/SeqFeature/Computation.t ............. ok
t/SeqFeature/FeaturePair.t ............. ok
t/SeqFeature/Gene.t .................... ok
t/SeqFeature/Location.t ................ ok
t/SeqFeature/Collection.t .............. ok
t/SeqFeature/LocationFactory.t ......... ok
t/SeqFeature/Range.t ................... ok
t/SeqFeature/Primer.t .................. ok
t/SeqFeature/RangeI.t .................. ok
t/SeqFeature/SubSeq.t .................. ok
t/SeqFeature/SeqAnalysisParser.t ....... ok
t/SeqFeature/Generic.t ................. ok
t/SeqIO/Multiple_fasta.t ............... ok
t/SeqIO/MultiFile.t .................... ok
t/SeqIO/SeqIO.t ........................ ok
t/SeqIO/SeqBuilder.t ................... ok
t/SeqIO/abi.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/Splicedseq.t ................... ok
t/SeqIO/ace.t .......................... ok
t/SeqIO/agave.t ........................ skipped: The optional module XML::Writer (or dependencies thereof) was not installed
t/SeqIO/alf.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/bsml.t ......................... skipped: The optional module XML::DOM (or dependencies thereof) was not installed
t/SeqIO/Handler.t ...................... ok
t/SeqIO/bsml_sax.t ..................... skipped: The optional module XML::SAX::Writer (or dependencies thereof) was not installed
t/SeqIO/asciitree.t .................... ok
t/SeqIO/chadoxml.t ..................... skipped: The optional module XML::Writer (or dependencies thereof) was not installed
t/SeqIO/ctf.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/chaos.t ........................ ok
t/SeqIO/entrezgene.t ................... skipped: The optional module Bio::ASN1::EntrezGene (or dependencies thereof) was not installed
t/SeqIO/chaosxml.t ..................... ok
t/SeqIO/excel.t ........................ skipped: The optional module Spreadsheet::ParseExcel (or dependencies thereof) was not installed
t/SeqIO/exp.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/embl.t ......................... ok
t/SeqIO/fasta.t ........................ ok
t/SeqIO/flybase_chadoxml.t ............. skipped: The optional module XML::Writer (or dependencies thereof) was not installed
t/SeqIO/game.t ......................... skipped: The optional module XML::Parser::PerlSAX (or dependencies thereof) was not installed
t/SeqIO/gbxml.t ........................ ok
t/SeqIO/gcg.t .......................... ok
t/SeqIO/fastq.t ........................ ok
t/SeqIO/interpro.t ..................... skipped: The optional module XML::DOM::XPath (or dependencies thereof) was not installed
t/SeqIO/kegg.t ......................... ok
t/SeqIO/largefasta.t ................... ok
t/SeqIO/lasergene.t .................... ok
t/SeqIO/mbsout.t ....................... ok
t/SeqIO/locuslink.t .................... ok
t/SeqIO/metafasta.t .................... ok
t/SeqIO/genbank.t ...................... ok
t/SeqIO/nexml.t ........................ skipped: The optional module Bio::Phylo (or dependencies thereof) was not installed
t/SeqIO/msout.t ........................ ok
t/SeqIO/phd.t .......................... ok
t/SeqIO/pir.t .......................... ok
t/SeqIO/pln.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/qual.t ......................... ok
t/SeqIO/raw.t .......................... ok
t/SeqIO/strider.t ...................... skipped: The optional module Convert::Binary::C (or dependencies thereof) was not installed
t/SeqIO/seqxml.t ....................... skipped: The optional module XML::Writer (or dependencies thereof) was not installed
t/SeqIO/tab.t .......................... ok
t/SeqIO/swiss.t ........................ ok
t/SeqIO/table.t ........................ ok
t/SeqIO/tigr.t ......................... skipped: The optional module Error (or dependencies thereof) was not installed
t/SeqIO/tigrxml.t ...................... skipped: The optional module XML::SAX::Writer (or dependencies thereof) was not installed
t/SeqIO/ztr.t .......................... skipped: The optional module Bio::SeqIO::staden::read (or dependencies thereof) was not installed
t/SeqIO/tinyseq.t ...................... skipped: The optional module XML::Parser::PerlSAX (or dependencies thereof) was not installed
t/SeqTools/CodonTable.t ................ ok
t/SeqTools/Backtranslate.t ............. ok
t/SeqTools/ECnumber.t .................. ok
t/SeqTools/OddCodes.t .................. ok
t/SeqTools/GuessSeqFormat.t ............ ok
t/SeqTools/SeqPattern.t ................ ok
t/SeqIO/scf.t .......................... ok
t/SeqTools/SeqStats.t .................. ok
t/SeqTools/SeqUtils.t .................. ok
t/SeqTools/SeqWords.t .................. ok
t/Structure/Structure.t ................ ok
t/Species.t ............................ ok
t/Structure/IO.t ....................... ok
t/Symbol.t ............................. ok
t/TaxonTree.t .......................... skipped: These modules are now probably deprecated
t/Tools/Alignment/Consed.t ............. ok
t/Tools/AmpliconSearch.t ............... ok
t/Tools/Analysis/DNA/ESEfinder.t ....... skipped: Network tests have not been requested
t/Tools/Analysis/Protein/Domcut.t ...... skipped: Network tests have not been requested
t/Tools/Analysis/Protein/GOR4.t ........ skipped: Network tests have not been requested
t/Tools/Analysis/Protein/ELM.t ......... skipped: Network tests have not been requested
t/Tools/Analysis/Protein/HNN.t ......... skipped: Network tests have not been requested
t/Tools/Analysis/Protein/NetPhos.t ..... skipped: Network tests have not been requested
t/Tools/Analysis/Protein/Sopma.t ....... skipped: Network tests have not been requested
t/Tools/EMBOSS/Palindrome.t ............ ok
t/Tools/Analysis/Protein/Scansite.t .... ok
t/Tools/FootPrinter.t .................. ok
t/Tools/GFF.t .......................... ok
t/Tools/Est2Genome.t ................... ok
t/Tools/Geneid.t ....................... ok
t/Tools/Genewise.t ..................... ok
t/Tools/Genomewise.t ................... ok
t/Tools/IUPAC.t ........................ ok
t/Tools/Lucy.t ......................... ok
t/Tools/Genpred.t ...................... ok
t/Tools/Phylo/Gerp.t ................... ok
t/Tools/Match.t ........................ ok
t/Tools/Phylo/Phylip/ProtDist.t ........ ok
t/Tools/Phylo/Molphy.t ................. ok
t/Tools/Primer3.t ...................... ok
t/Tools/Promoterwise.t ................. ok
t/Tools/Hmmer.t ........................ ok
t/Tools/PrositeScan.t .................. ok
t/Tools/Pseudowise.t ................... ok
t/Tools/RandDistFunctions.t ............ ok
t/Tools/QRNA.t ......................... ok
t/Tools/RepeatMasker.t ................. ok
t/Tools/Run/RemoteBlast.t .............. skipped: Network tests have not been requested
t/Tools/Seg.t .......................... ok
t/Tools/Run/RemoteBlast_rpsblast.t ..... skipped: Network tests have not been requested
t/Tools/Sigcleave.t .................... ok
t/Tools/Signalp.t ...................... ok
t/Tools/SiRNA.t ........................ ok
t/Tools/Signalp/ExtendedSignalp.t ...... ok
t/Tools/Sim4.t ......................... ok
t/Tools/Spidey/Spidey.t ................ ok
t/Tools/TandemRepeatsFinder.t .......... ok
t/Tools/TargetP.t ...................... ok
t/Tools/Tmhmm.t ........................ ok
t/Tools/pICalculator.t ................. ok
t/Tools/ePCR.t ......................... ok
t/Tools/tRNAscanSE.t ................... ok
t/Tree/Node.t .......................... ok
t/Tree/Compatible.t .................... ok
t/Tree/PhyloNetwork/Factory.t .......... skipped: The optional module Bio::PhyloNetwork (or dependencies thereof) was not installed
t/Tree/PhyloNetwork/MuVector.t ......... ok
t/Tree/PhyloNetwork/GraphViz.t ......... skipped: The optional module Bio::PhyloNetwork (or dependencies thereof) was not installed
t/Tree/PhyloNetwork/PhyloNetwork.t ..... skipped: The optional module Array::Compare (or dependencies thereof) was not installed
t/Tree/PhyloNetwork/RandomFactory.t .... skipped: The optional module Bio::PhyloNetwork (or dependencies thereof) was not installed
t/Tree/PhyloNetwork/TreeFactory.t ...... skipped: The optional module Bio::PhyloNetwork (or dependencies thereof) was not installed
t/Tree/RandomTreeFactory.t ............. ok
t/Tree/Tree.t .......................... ok
t/Tree/TreeIO/lintree.t ................ ok
t/Tree/TreeIO/nexml.t .................. skipped: The optional module Bio::Phylo (or dependencies thereof) was not installed
t/Tree/TreeIO/newick.t ................. ok
t/Tree/TreeIO.t ........................ ok
t/Tree/TreeIO/nhx.t .................... ok
t/Tree/TreeIO/nexus.t .................. ok
t/Tree/TreeIO/phyloxml.t ............... ok
t/Tree/TreeIO/svggraph.t ............... ok
t/Tree/TreeIO/tabtree.t ................ ok
t/Tree/TreeStatistics.t ................ ok
t/Variation/AAChange.t ................. ok
t/Variation/AAReverseMutate.t .......... ok
t/Variation/Allele.t ................... ok
t/Variation/DNAMutation.t .............. ok
t/Variation/RNAChange.t ................ ok
t/Variation/SNP.t ...................... ok
t/Variation/Variation_IO.t ............. skipped: The optional module XML::Writer (or dependencies thereof) was not installed
t/Variation/SeqDiff.t .................. ok
t/nexml.t .............................. skipped: The optional module Bio::Phylo (or dependencies thereof) was not installed
t/SeqFeature/Unflattener.t ............. ok
All tests successful.
Files=325, Tests=20242, 151 wallclock secs (11.77 usr 1.89 sys + 408.57 cusr 40.67 csys = 462.90 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------ ------ --------
Data::Stag 0.11 0.14
ExtUtils::Manifest 1.52 1.70
IO::String 0 1.08
perl v5.6.1 5.024002
Scalar::Util 0 1.48
build_requires:
Module Need Have
------------------ ------ --------
CPAN 1.81 2.16
Module::Build 0.42 0.4224
Test::Harness 2.62 3.36_01
Test::Most 0 0.35
URI::Escape 0 3.31
configure_requires:
Module Need Have
------------------ ------ --------
Module::Build 0.42 0.4224
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
HARNESS_OPTIONS = j4
LANG = en_US.UTF-8
LANGUAGE = en_US.UTF-8
LC_ALL = en_US.UTF-8
PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.24.2/bin:/home/njh/src/njh/smoker/bin:/usr/bin:/bin
PERL5LIB = /home/njh/.cpan/build/Data-Stag-0.14-71/blib/arch:/home/njh/.cpan/build/Data-Stag-0.14-71/blib/lib:/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/arch:/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/lib:/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/arch:/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/lib:/home/njh/.cpan/build/Graph-0.9704-4/blib/arch:/home/njh/.cpan/build/Graph-0.9704-4/blib/lib:/home/njh/.cpan/build/Mojolicious-7.60-35/blib/arch:/home/njh/.cpan/build/Mojolicious-7.60-35/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/lib:/home/njh/.cpan/build/URI-Query-0.16-63/blib/arch:/home/njh/.cpan/build/URI-Query-0.16-63/blib/lib:/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/arch:/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/lib:/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/arch:/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/lib:/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/arch:/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/lib:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/arch:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/lib:/home/njh/.cpan/build/spamcupNG-0.7-17/blib/arch:/home/njh/.cpan/build/spamcupNG-0.7-17/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/lib:/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/arch:/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/lib:/home/njh/.cpan/build/Moo-2.003004-63/blib/arch:/home/njh/.cpan/build/Moo-2.003004-63/blib/lib:/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/arch:/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/lib:/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/arch:/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/lib:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/arch:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/lib:/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/arch:/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/lib:/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/arch:/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/lib:/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/arch:/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 9000
PERL5_CPAN_IS_RUNNING = 9000
PERLBREW_BASHRC_VERSION = 0.78
PERLBREW_HOME = /home/njh/.perlbrew
PERLBREW_MANPATH = /home/njh/perl5/perlbrew/perls/perl-5.24.2/man
PERLBREW_PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.24.2/bin
PERLBREW_PERL = perl-5.24.2
PERLBREW_ROOT = /home/njh/perl5/perlbrew
PERLBREW_VERSION = 0.78
SHELL = /bin/sh
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/njh/perl5/perlbrew/perls/perl-5.24.2/bin/perl5.24.2
$UID/$EUID = 1000 / 1000
$GID = 1000 1000
$EGID = 1000 1000
Perl module toolchain versions installed:
Module Have
------------------- ----------
CPAN 2.16
CPAN::Meta 2.150005
Cwd 3.63_01
ExtUtils::CBuilder 0.280225
ExtUtils::Command 7.30
ExtUtils::Install 2.06
ExtUtils::MakeMaker 7.30
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.31
File::Spec 3.63_01
JSON 2.94
JSON::PP 2.27300_01
Module::Build 0.4224
Module::Signature n/a
Parse::CPAN::Meta 1.4417_001
Test::Harness 3.36_01
Test::More 1.302086
YAML 1.24
YAML::Syck 1.30
version 0.9916
--
Summary of my perl5 (revision 5 version 24 subversion 2) configuration:
Platform:
osname=linux, osvers=4.9.23-std-1, archname=aarch64-linux-thread-multi
uname='linux scaleway 4.9.23-std-1 #1 smp mon apr 24 13:18:14 utc 2017 aarch64 gnulinux '
config_args='-de -Dprefix=/home/njh/perl5/perlbrew/perls/perl-5.24.2 -Duseithreads -Dusemultiplicity -Dusedevel -Accflags=-O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -Aeval:scriptdir=/home/njh/perl5/perlbrew/perls/perl-5.24.2/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=define, usemultiplicity=define
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -fwrapv -fno-strict-aliasing -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-D_REENTRANT -D_GNU_SOURCE -O2 -W -Wformat=2 -Wswitch -Wshadow -Wwrite-strings -Wuninitialized -Wall -pipe -fomit-frame-pointer -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wstrict-prototypes -fstack-protector -Wstack-protector -Wextra -Wbad-function-cast -Wcast-align -Wcast-qual -Wdisabled-optimization -Wendif-labels -Wfloat-equal -Wformat-nonliteral -Winline -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wpointer-arith -Wundef -Wformat-security -march=armv8-a+crc -fwrapv -fno-strict-aliasing -fstack-protector-strong -I/usr/local/include'
ccversion='', gccversion='6.3.0 20170516', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678, doublekind=3
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16, longdblkind=1
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/aarch64-linux-gnu/6/include-fixed /usr/include/aarch64-linux-gnu /usr/lib /lib/aarch64-linux-gnu /lib/../lib /usr/lib/aarch64-linux-gnu /usr/lib/../lib /lib
libs=-lpthread -lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.24.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.24'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
PERL_COPY_ON_WRITE PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV PERL_USE_DEVEL USE_64_BIT_ALL
USE_64_BIT_INT USE_ITHREADS USE_LARGE_FILES
USE_LOCALE USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_LOCALE_TIME USE_PERLIO
USE_PERL_ATOF USE_REENTRANT_API
Locally applied patches:
Devel::PatchPerl 1.48
Built under linux
Compiled at Jul 19 2017 11:03:08
%ENV:
PERL5LIB="/home/njh/.cpan/build/Data-Stag-0.14-71/blib/arch:/home/njh/.cpan/build/Data-Stag-0.14-71/blib/lib:/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/arch:/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/lib:/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/arch:/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/lib:/home/njh/.cpan/build/Graph-0.9704-4/blib/arch:/home/njh/.cpan/build/Graph-0.9704-4/blib/lib:/home/njh/.cpan/build/Mojolicious-7.60-35/blib/arch:/home/njh/.cpan/build/Mojolicious-7.60-35/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/lib:/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/arch:/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/lib:/home/njh/.cpan/build/URI-Query-0.16-63/blib/arch:/home/njh/.cpan/build/URI-Query-0.16-63/blib/lib:/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/arch:/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/lib:/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/arch:/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/lib:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/arch:/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/lib:/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/arch:/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/lib:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/arch:/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/lib:/home/njh/.cpan/build/spamcupNG-0.7-17/blib/arch:/home/njh/.cpan/build/spamcupNG-0.7-17/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/lib:/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/arch:/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/lib:/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/arch:/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/lib:/home/njh/.cpan/build/Moo-2.003004-63/blib/arch:/home/njh/.cpan/build/Moo-2.003004-63/blib/lib:/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/arch:/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/lib:/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/arch:/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/lib:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/arch:/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/lib:/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/arch:/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/lib:/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/arch:/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/lib:/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/arch:/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="9000"
PERL5_CPAN_IS_RUNNING="9000"
PERLBREW_BASHRC_VERSION="0.78"
PERLBREW_HOME="/home/njh/.perlbrew"
PERLBREW_MANPATH="/home/njh/perl5/perlbrew/perls/perl-5.24.2/man"
PERLBREW_PATH="/home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.24.2/bin"
PERLBREW_PERL="perl-5.24.2"
PERLBREW_ROOT="/home/njh/perl5/perlbrew"
PERLBREW_VERSION="0.78"
@INC:
/home/njh/.cpan/build/Data-Stag-0.14-71/blib/arch
/home/njh/.cpan/build/Data-Stag-0.14-71/blib/lib
/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/arch
/home/njh/.cpan/build/Graph-Feather-0.01-4/blib/lib
/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/arch
/home/njh/.cpan/build/List-UtilsBy-0.10-4/blib/lib
/home/njh/.cpan/build/Graph-0.9704-4/blib/arch
/home/njh/.cpan/build/Graph-0.9704-4/blib/lib
/home/njh/.cpan/build/Mojolicious-7.60-35/blib/arch
/home/njh/.cpan/build/Mojolicious-7.60-35/blib/lib
/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/arch
/home/njh/.cpan/build/WebService-Coincheck-0.02-71/blib/lib
/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/arch
/home/njh/.cpan/build/WebService-Coincheck-0.01-71/blib/lib
/home/njh/.cpan/build/URI-Query-0.16-63/blib/arch
/home/njh/.cpan/build/URI-Query-0.16-63/blib/lib
/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/arch
/home/njh/.cpan/build/Test-AllModules-0.15-63/blib/lib
/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/arch
/home/njh/.cpan/build/String-CamelCase-0.03-63/blib/lib
/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/arch
/home/njh/.cpan/build/Module-Build-Pluggable-CPANfile-0.05-71/blib/lib
/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/arch
/home/njh/.cpan/build/Module-Build-Pluggable-0.10-71/blib/lib
/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/arch
/home/njh/.cpan/build/Test-SharedFork-0.35-71/blib/lib
/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/arch
/home/njh/.cpan/build/Class-Accessor-Lite-0.08-71/blib/lib
/home/njh/.cpan/build/spamcupNG-0.7-17/blib/arch
/home/njh/.cpan/build/spamcupNG-0.7-17/blib/lib
/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/arch
/home/njh/.cpan/build/DBIx-Struct-0.45-70/blib/lib
/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/arch
/home/njh/.cpan/build/DBIx-Struct-0.44-70/blib/lib
/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/arch
/home/njh/.cpan/build/DBIx-Struct-0.42-70/blib/lib
/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/arch
/home/njh/.cpan/build/SQL-Abstract-1.84-68/blib/lib
/home/njh/.cpan/build/Moo-2.003004-63/blib/arch
/home/njh/.cpan/build/Moo-2.003004-63/blib/lib
/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/arch
/home/njh/.cpan/build/Sub-Quote-2.004000-62/blib/lib
/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/arch
/home/njh/.cpan/build/Role-Tiny-2.000006-63/blib/lib
/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/arch
/home/njh/.cpan/build/Class-Method-Modifiers-2.12-64/blib/lib
/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/arch
/home/njh/.cpan/build/Hash-Merge-0.299-68/blib/lib
/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/arch
/home/njh/.cpan/build/Clone-Choose-0.008-68/blib/lib
/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/arch
/home/njh/.cpan/build/DBIx-Connector-0.56-53/blib/lib
/home/njh/perl5/perlbrew/perls/perl-5.24.2/lib/site_perl/5.24.2/aarch64-linux-thread-multi
/home/njh/perl5/perlbrew/perls/perl-5.24.2/lib/site_perl/5.24.2
/home/njh/perl5/perlbrew/perls/perl-5.24.2/lib/5.24.2/aarch64-linux-thread-multi
/home/njh/perl5/perlbrew/perls/perl-5.24.2/lib/5.24.2
.