Qiime2-Reader v0.10.1 Perl 5 v5.28.1 x86_64-linux-gnu-thread-multi

Status
Pass
From
Slaven Rezić (SREZIC)
Dist
Qiime2-Reader v0.10.1
Platform
Perl 5 v5.28.1 x86_64-linux-gnu-thread-multi
Date
2020-01-23T14:54:38
ID
471849e2-3df0-11ea-88ef-b4241f24ea8f
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear Andrea Telatin,

This is a computer-generated report for Qiime2-Reader-0.10.1
on perl 5.28.1, created by CPAN-Reporter-1.2018.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

none provided

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/10_basic_test.t ................. ok
t/11_load.t ....................... ok
Not a valid artifact /home/cpansand/.cpan/build/2020012314/Qiime2-Reader-0.10.1-0/t/../data/bad_artifact.zip:
 [Qiime2::Reader ERROR]
 /home/cpansand/.cpan/build/2020012314/Qiime2-Reader-0.10.1-0/data/bad_artifact.zip is not a valid artifact:
  "{id}/directory/data" structure expected, found:
  "d27b6a68-5c6e-46d9-9866-7b4d46cca533/"
 ------------------------------------------------------------
t/11_not_a_valid_artifact.t ....... ok
Raise exception:
 [Qiime2::Reader ERROR]
 /home/cpansand/.cpan/build/2020012314/Qiime2-Reader-0.10.1-0/data/sample_metadata.tsv is not a ZIP file
 ------------------------------------------------------------
t/11_not_a_zip.t .................. ok
Not a valid artifact /home/cpansand/.cpan/build/2020012314/Qiime2-Reader-0.10.1-0/t/../data/non_artifact.zip:
 [Qiime2::Reader ERROR]
 /home/cpansand/.cpan/build/2020012314/Qiime2-Reader-0.10.1-0/data/non_artifact.zip is not a valid artifact:
  "{id}/directory/data" structure expected, found:
  "README.md"
 ------------------------------------------------------------
t/11_not_an_artifact.t ............ ok
t/release-00-pod.t ................ skipped: these tests are for release candidate testing
t/release-03-minimum-standards.t .. skipped: these tests are for release candidate testing
t/release-05-changes.t ............ skipped: these tests are for release candidate testing
All tests successful.
Files=8, Tests=10,  1 wallclock secs ( 0.03 usr  0.02 sys +  0.46 cusr  0.30 csys =  0.81 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module              Need  Have    
    ------------------- ----- --------
    Capture::Tiny       0.48  0.48    
    Carp                1.2   1.50    
    Data::Dumper        2.1   2.170   
    FindBin             1.3   1.51    
    perl                5.018 5.028001
    YAML::PP            0.018 0.018   

build_requires:

    Module              Need  Have    
    ------------------- ----- --------
    ExtUtils::MakeMaker 0     7.34    

configure_requires:

    Module              Need  Have    
    ------------------- ----- --------
    Devel::CheckBin     0     0.04    
    ExtUtils::MakeMaker 0     7.34    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    LANG = C
    PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/linux-gnu:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
    PERL5LIB = /home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/arch:/home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 11404
    PERL5_CPAN_IS_RUNNING = 11404
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 11268,11404
    PERLDOC = -MPod::Perldoc::ToTextOverstrike
    PERL_BATCH = yes
    PERL_CANARY_STABILITY_NOPROMPT = 1
    PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1023/2020012314/cpanreporter_000_config.ini
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_USE_UNSAFE_INC = 1
    SHELL = /usr/bin/zsh
    TERM = screen
    TMPDIR = /var/tmp/cpansmoker-1023/2020012314

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /usr/bin/perl
    $UID/$EUID = 1023 / 1023
    $GID = 1023 1023
    $EGID = 1023 1023

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.20    
    CPAN::Meta          2.150010
    Cwd                 3.74    
    ExtUtils::CBuilder  0.280230
    ExtUtils::Command   7.34    
    ExtUtils::Install   2.14    
    ExtUtils::MakeMaker 7.34    
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.39    
    File::Spec          3.74    
    JSON                n/a     
    JSON::PP            2.97001 
    Module::Build       n/a     
    Module::Signature   n/a     
    Parse::CPAN::Meta   2.150010
    Test::Harness       3.42    
    Test::More          1.302133
    YAML                n/a     
    YAML::Syck          1.31    
    version             0.9923  


--

Summary of my perl5 (revision 5 version 28 subversion 1) configuration:
   
  Platform:
    osname=linux
    osvers=4.9.0
    archname=x86_64-linux-gnu-thread-multi
    uname='linux localhost 4.9.0 #1 smp debian 4.9.0 x86_64 gnulinux '
    config_args='-Dusethreads -Duselargefiles -Dcc=x86_64-linux-gnu-gcc -Dcpp=x86_64-linux-gnu-cpp -Dld=x86_64-linux-gnu-gcc -Dccflags=-DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/perl-5WfRyb/perl-5.28.1=. -fstack-protector-strong -Wformat -Werror=format-security -Dldflags= -Wl,-z,relro -Dlddlflags=-shared -Wl,-z,relro -Dcccdlflags=-fPIC -Darchname=x86_64-linux-gnu -Dprefix=/usr -Dprivlib=/usr/share/perl/5.28 -Darchlib=/usr/lib/x86_64-linux-gnu/perl/5.28 -Dvendorprefix=/usr -Dvendorlib=/usr/share/perl5 -Dvendorarch=/usr/lib/x86_64-linux-gnu/perl5/5.28 -Dsiteprefix=/usr/local -Dsitelib=/usr/local/share/perl/5.28.1 -Dsitearch=/usr/local/lib/x86_64-linux-gnu/perl/5.28.1 -Dman1dir=/usr/share/man/man1 -Dman3dir=/usr/share/man/man3 -Dsiteman1dir=/usr/local/man/man1 -Dsiteman3dir=/usr/local/man/man3 -Duse64bitint -Dman1ext=1 -Dman3ext=3perl -Dpager=/usr/bin/sensible-pager -Uafs -Ud_csh -Ud_ualarm -Uusesfio -Uusenm -Ui_libutil -Ui_xlocale -Uversiononly -DDEBUGGING=-g -Doptimize=-O2 -dEs -Duseshrplib -Dlibperl=libperl.so.5.28.1'
    hint=recommended
    useposix=true
    d_sigaction=define
    useithreads=define
    usemultiplicity=define
    use64bitint=define
    use64bitall=define
    uselongdouble=undef
    usemymalloc=n
    default_inc_excludes_dot=define
    bincompat5005=undef
  Compiler:
    cc='x86_64-linux-gnu-gcc'
    ccflags ='-D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64'
    optimize='-O2 -g'
    cppflags='-D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include'
    ccversion=''
    gccversion='8.3.0'
    gccosandvers=''
    intsize=4
    longsize=8
    ptrsize=8
    doublesize=8
    byteorder=12345678
    doublekind=3
    d_longlong=define
    longlongsize=8
    d_longdbl=define
    longdblsize=16
    longdblkind=3
    ivtype='long'
    ivsize=8
    nvtype='double'
    nvsize=8
    Off_t='off_t'
    lseeksize=8
    alignbytes=8
    prototype=define
  Linker and Libraries:
    ld='x86_64-linux-gnu-gcc'
    ldflags =' -fstack-protector-strong -L/usr/local/lib'
    libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/8/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
    libs=-lgdbm -lgdbm_compat -ldb -ldl -lm -lpthread -lc -lcrypt
    perllibs=-ldl -lm -lpthread -lc -lcrypt
    libc=libc-2.28.so
    so=so
    useshrplib=true
    libperl=libperl.so.5.28
    gnulibc_version='2.28'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs
    dlext=so
    d_dlsymun=undef
    ccdlflags='-Wl,-E'
    cccdlflags='-fPIC'
    lddlflags='-shared -L/usr/local/lib -fstack-protector-strong'


Characteristics of this binary (from libperl): 
  Compile-time options:
    HAS_TIMES
    MULTIPLICITY
    PERLIO_LAYERS
    PERL_COPY_ON_WRITE
    PERL_DONT_CREATE_GVSV
    PERL_IMPLICIT_CONTEXT
    PERL_MALLOC_WRAP
    PERL_OP_PARENT
    PERL_PRESERVE_IVUV
    USE_64_BIT_ALL
    USE_64_BIT_INT
    USE_ITHREADS
    USE_LARGE_FILES
    USE_LOCALE
    USE_LOCALE_COLLATE
    USE_LOCALE_CTYPE
    USE_LOCALE_NUMERIC
    USE_LOCALE_TIME
    USE_PERLIO
    USE_PERL_ATOF
    USE_REENTRANT_API
  Locally applied patches:
    DEBPKG:debian/cpan_definstalldirs - Provide a sensible INSTALLDIRS default for modules installed from CPAN.
    DEBPKG:debian/db_file_ver - https://bugs.debian.org/340047 Remove overly restrictive DB_File version check.
    DEBPKG:debian/doc_info - Replace generic man(1) instructions with Debian-specific information.
    DEBPKG:debian/enc2xs_inc - https://bugs.debian.org/290336 Tweak enc2xs to follow symlinks and ignore missing @INC directories.
    DEBPKG:debian/errno_ver - https://bugs.debian.org/343351 Remove Errno version check due to upgrade problems with long-running processes.
    DEBPKG:debian/libperl_embed_doc - https://bugs.debian.org/186778 Note that libperl-dev package is required for embedded linking
    DEBPKG:fixes/respect_umask - Respect umask during installation
    DEBPKG:debian/writable_site_dirs - Set umask approproately for site install directories
    DEBPKG:debian/extutils_set_libperl_path - EU:MM: set location of libperl.a under /usr/lib
    DEBPKG:debian/no_packlist_perllocal - Don't install .packlist or perllocal.pod for perl or vendor
    DEBPKG:debian/fakeroot - Postpone LD_LIBRARY_PATH evaluation to the binary targets.
    DEBPKG:debian/instmodsh_doc - Debian policy doesn't install .packlist files for core or vendor.
    DEBPKG:debian/ld_run_path - Remove standard libs from LD_RUN_PATH as per Debian policy.
    DEBPKG:debian/libnet_config_path - Set location of libnet.cfg to /etc/perl/Net as /usr may not be writable.
    DEBPKG:debian/perlivp - https://bugs.debian.org/510895 Make perlivp skip include directories in /usr/local
    DEBPKG:debian/squelch-locale-warnings - https://bugs.debian.org/508764 Squelch locale warnings in Debian package maintainer scripts
    DEBPKG:debian/patchlevel - https://bugs.debian.org/567489 List packaged patches for 5.28.1-6 in patchlevel.h
    DEBPKG:fixes/document_makemaker_ccflags - https://bugs.debian.org/628522 [rt.cpan.org #68613] Document that CCFLAGS should include $Config{ccflags}
    DEBPKG:debian/find_html2text - https://bugs.debian.org/640479 Configure CPAN::Distribution with correct name of html2text
    DEBPKG:debian/perl5db-x-terminal-emulator.patch - https://bugs.debian.org/668490 Invoke x-terminal-emulator rather than xterm in perl5db.pl
    DEBPKG:debian/cpan-missing-site-dirs - https://bugs.debian.org/688842 Fix CPAN::FirstTime defaults with nonexisting site dirs if a parent is writable
    DEBPKG:fixes/memoize_storable_nstore - [rt.cpan.org #77790] https://bugs.debian.org/587650 Memoize::Storable: respect 'nstore' option not respected
    DEBPKG:debian/makemaker-pasthru - https://bugs.debian.org/758471 Pass LD settings through to subdirectories
    DEBPKG:debian/makemaker-manext - https://bugs.debian.org/247370 Make EU::MakeMaker honour MANnEXT settings in generated manpage headers
    DEBPKG:debian/kfreebsd-softupdates - https://bugs.debian.org/796798 Work around Debian Bug#796798
    DEBPKG:fixes/autodie-scope - https://bugs.debian.org/798096 Fix a scoping issue with "no autodie" and the "system" sub
    DEBPKG:fixes/memoize-pod - [rt.cpan.org #89441] Fix POD errors in Memoize
    DEBPKG:debian/hurd-softupdates - https://bugs.debian.org/822735 Fix t/op/stat.t failures on hurd
    DEBPKG:fixes/math_complex_doc_great_circle - https://bugs.debian.org/697567 [rt.cpan.org #114104] Math::Trig: clarify definition of great_circle_midpoint
    DEBPKG:fixes/math_complex_doc_see_also - https://bugs.debian.org/697568 [rt.cpan.org #114105] Math::Trig: add missing SEE ALSO
    DEBPKG:fixes/math_complex_doc_angle_units - https://bugs.debian.org/731505 [rt.cpan.org #114106] Math::Trig: document angle units
    DEBPKG:fixes/cpan_web_link - https://bugs.debian.org/367291 CPAN: Add link to main CPAN web site
    DEBPKG:debian/hppa_op_optimize_workaround - https://bugs.debian.org/838613 Temporarily lower the optimization of op.c on hppa due to gcc-6 problems
    DEBPKG:debian/installman-utf8 - https://bugs.debian.org/840211 Generate man pages with UTF-8 characters
    DEBPKG:fixes/getopt-long-4 - https://bugs.debian.org/864544 [rt.cpan.org #122068] Fix issue #122068.
    DEBPKG:debian/hppa_opmini_optimize_workaround - https://bugs.debian.org/869122 Lower the optimization level of opmini.c on hppa
    DEBPKG:debian/sh4_op_optimize_workaround - https://bugs.debian.org/869373 Also lower the optimization level of op.c and opmini.c on sh4
    DEBPKG:debian/perldoc-pager - https://bugs.debian.org/870340 [rt.cpan.org #120229] Fix perldoc terminal escapes when sensible-pager is less
    DEBPKG:debian/prune_libs - https://bugs.debian.org/128355 Prune the list of libraries wanted to what we actually need.
    DEBPKG:debian/mod_paths - Tweak @INC ordering for Debian
    DEBPKG:debian/configure-regen - https://bugs.debian.org/762638 Regenerate Configure et al. after probe unit changes
    DEBPKG:debian/deprecate-with-apt - https://bugs.debian.org/747628 Point users to Debian packages of deprecated core modules
    DEBPKG:debian/disable-stack-check - https://bugs.debian.org/902779 [perl #133327] Disable debugperl stack extension checks for binary compatibility with perl
    DEBPKG:debian/gdbm-fatal - [perl #133295] https://bugs.debian.org/904005 Temporarily skip GDBM_File fatal.t for gdbm >= 1.15 compatibility
    DEBPKG:fixes/storable-recursion - https://bugs.debian.org/912900 [perl #133326] [120060c] (perl #133326) fix and clarify handling of recurs_sv.
    DEBPKG:fixes/caretx-fallback - https://bugs.debian.org/913347 [perl #133573] [03b94aa] RT#133573: $^X fallback when platform-specific technique fails
    DEBPKG:fixes/eumm-usrmerge - https://bugs.debian.org/913637 Avoid mangling /bin non-perl shebangs on merged-/usr systems
    DEBPKG:fixes/errno-include-path - [6c5080f] [perl #133662] https://bugs.debian.org/875921 Make Errno_pm.PL compatible with /usr/include/<ARCH>/errno.h
    DEBPKG:fixes/kfreebsd-renameat - [a3c63a9] https://bugs.debian.org/912521 [perl #133668] Also work around renameat() kernel bug on GNU/kFreeBSD
    DEBPKG:fixes/time-local-2020 - https://bugs.debian.org/915209 [rt.cpan.org #124787] Fix Time::Local tests
    DEBPKG:fixes/inplace-editing-bugfix/part1 - https://bugs.debian.org/914651 (perl #133659) move argvout cleanup to a new function
    DEBPKG:fixes/inplace-editing-bugfix/part2 - https://bugs.debian.org/914651 (perl #133659) tests for global destruction handling of inplace editing
    DEBPKG:fixes/inplace-editing-bugfix/part3 - https://bugs.debian.org/914651 (perl #133659) make an in-place edit successful if the exit status is zero
    DEBPKG:fixes/fix-manifest-failures - https://bugs.debian.org/914962 Fix t/porting/manifest.t failures when run in a foreign git checkout
    DEBPKG:fixes/pipe-open-bugfix/part1 - [perl #133726] https://bugs.debian.org/916313 Always mark pipe in pipe-open as inherit-on-exec
    DEBPKG:fixes/pipe-open-bugfix/part2 - [perl #133726] https://bugs.debian.org/916313 Always mark pipe in list pipe-open as inherit-on-exec
    DEBPKG:fixes/storable-probing/prereq1 - [3f4cad1] Storable: fix for strawberry build failures:
    DEBPKG:fixes/storable-probing/prereq2 - [perl #133411] [edf639f] (perl #133411) don't try to load Storable with -Dusecrosscompile
    DEBPKG:fixes/storable-probing/disable-probing - https://bugs.debian.org/914133 [perl #133708] [2a0bbd3] (perl #133708) remove build-time probing for stack limits for Storable
    DEBPKG:debian/perlbug-editor - https://bugs.debian.org/922609 Use "editor" as the default perlbug editor, as per Debian policy
    DEBPKG:fixes/posix-mbrlen - [25d7b7a] https://bugs.debian.org/924517 [perl #133928] Fix POSIX::mblen mbstate_t initialization on threaded perls with glibc
  Built under linux
  Compiled at Mar 31 2019 11:51:22
  %ENV:
    PERL5LIB="/home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/arch:/home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/lib:/home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/arch:/home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/lib"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="11404"
    PERL5_CPAN_IS_RUNNING="11404"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="11268,11404"
    PERLDOC="-MPod::Perldoc::ToTextOverstrike"
    PERL_BATCH="yes"
    PERL_CANARY_STABILITY_NOPROMPT="1"
    PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1023/2020012314/cpanreporter_000_config.ini"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    /home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/arch
    /home/cpansand/.cpan/build/2020012314/YAML-PP-0.018-1/blib/lib
    /home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/arch
    /home/cpansand/.cpan/build/2020012314/Test-Warn-0.36-1/blib/lib
    /home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/arch
    /home/cpansand/.cpan/build/2020012314/Sub-Uplevel-0.2800-1/blib/lib
    /home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/arch
    /home/cpansand/.cpan/build/2020012314/Test-Deep-1.128-1/blib/lib
    /home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/arch
    /home/cpansand/.cpan/build/2020012314/Devel-CheckBin-0.04-1/blib/lib
    /etc/perl
    /usr/local/lib/x86_64-linux-gnu/perl/5.28.1
    /usr/local/share/perl/5.28.1
    /usr/lib/x86_64-linux-gnu/perl5/5.28
    /usr/share/perl5
    /usr/lib/x86_64-linux-gnu/perl/5.28
    /usr/share/perl/5.28
    /usr/local/lib/site_perl
    /usr/lib/x86_64-linux-gnu/perl-base
    .