MS v0.207003 Perl 5 v5.40.0 aarch64-freebsd

Status
Pass
From
Slaven Rezić
Dist
MS v0.207003
Platform
Perl 5 v5.40.0 aarch64-freebsd
Date
2024-09-29 21:46:54
ID
57d2c6a2-7eac-11ef-bd45-be2d6e8775ea
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear Jeremy Volkening,

This is a computer-generated report for MS-0.207003
on perl 5.40.0, created by CPAN-Reporter-1.2019.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

none provided

------------------------------
PROGRAM OUTPUT
------------------------------

Output from './Build test':

# Testing MS 0.207003, Perl 5.040000, /usr/perl5.40.0/bin/perl
t/00-load.t ....... ok
t/boilerplate.t ... ok
t/cv.t ............ ok
t/db.t ............ ok
t/imzml.t ......... ok
Undefined elem Qq at t/mass.t line 47.
Undefined brick FooBar at t/mass.t line 52.
Undefined elem Foo at t/mass.t line 54.
t/mass.t .......... ok
t/mgf.t ........... ok
t/ms1.t ........... ok
t/ms2.t ........... ok
t/mzidentml.t ..... ok
t/mzml.t .......... ok
t/mzquantml.t ..... ok
t/mzxml.t ......... ok
Smartmatch is deprecated at t/peptide.t line 66.
Undefined mod Fosfo at /home/cpansand/.cpan/build/2024092921/MS-0.207003-0/blib/lib/MS/Peptide.pm line 225.
t/peptide.t ....... ok
t/pepxml.t ........ ok
t/pod-coverage.t .. ok
t/pod.t ........... ok
t/protein.t ....... ok
t/protxml.t ....... ok
t/search.t ........ ok
t/zz-manifest.t ... skipped: Author tests not required for installation
All tests successful.

Test Summary Report
-------------------
t/boilerplate.t (Wstat: 0 Tests: 3 Failed: 0)
  TODO passed:   1-3
Files=21, Tests=429, 18 wallclock secs ( 0.12 usr  0.06 sys +  7.33 cusr  0.64 csys =  8.16 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module            Need Have    
    ----------------- ---- --------
    BioX::Seq         0    0.008009
    Compress::BGZF    0    0.007001
    Data::Lock        0    1.03    
    File::ShareDir    1.00 1.118   
    HTTP::Tiny        0    0.088   
    List::MoreUtils   0    0.430   
    Module::Pluggable 0    5.2     
    Net::FTP          0    3.15    
    PerlIO::gzip      0    0.20    
    URI               0    5.28    
    XML::Parser       0    2.47    

build_requires:

    Module            Need Have    
    ----------------- ---- --------
    BioX::Seq         0    0.008009
    Module::Build     0    0.4234  
    Test::Fatal       0    0.017   
    Test::More        0    1.302202

configure_requires:

    Module            Need Have    
    ----------------- ---- --------
    Module::Build     0    0.4234  


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    LANG = C.UTF-8
    PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/freebsd14.0:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
    PERL5LIB = /home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/arch:/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 89199
    PERL5_CPAN_IS_RUNNING = 89199
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 77632,89199
    PERLDOC = -MPod::Perldoc::ToTextOverstrike
    PERL_BATCH = yes
    PERL_CANARY_STABILITY_NOPROMPT = 1
    PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1023/2024092920/cpanreporter_000_config.ini
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_USE_UNSAFE_INC = 1
    SHELL = /usr/local/bin/zsh
    TERM = screen
    TMPDIR = /var/tmp/cpansmoker-1023/2024092920

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /usr/perl5.40.0/bin/perl
    $UID/$EUID = 1023 / 1023
    $GID = 1023 1023
    $EGID = 1023 1023

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.36    
    CPAN::Meta          2.150010
    Cwd                 3.90    
    ExtUtils::CBuilder  0.280240
    ExtUtils::Command   7.70    
    ExtUtils::Install   2.22    
    ExtUtils::MakeMaker 7.70    
    ExtUtils::Manifest  1.75    
    ExtUtils::ParseXS   3.51    
    File::Spec          3.90    
    JSON                4.10    
    JSON::PP            4.16    
    Module::Build       0.4234  
    Module::Signature   n/a     
    Parse::CPAN::Meta   2.150010
    Test2               1.302202
    Test::Harness       3.48    
    Test::More          1.302202
    YAML                1.31    
    YAML::Syck          1.34    
    version             0.9930  


--

Summary of my perl5 (revision 5 version 40 subversion 0) configuration:
   
  Platform:
    osname=freebsd
    osvers=14.1-stable
    archname=aarch64-freebsd
    uname='freebsd cloud9.bbbike.org 14.1-stable freebsd 14.1-stable stable14-n267861-7dceb87a371e generic arm64 '
    config_args='-ds -e -Dprefix=/usr/perl5.40.0 -Dcf_email=srezic@cpan.org -Doptimize=-O2 -pipe'
    hint=recommended
    useposix=true
    d_sigaction=define
    useithreads=undef
    usemultiplicity=undef
    use64bitint=define
    use64bitall=define
    uselongdouble=undef
    usemymalloc=n
    default_inc_excludes_dot=define
  Compiler:
    cc='cc'
    ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DNO_POSIX_2008_LOCALE -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
    optimize='-O2 -pipe'
    cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DNO_POSIX_2008_LOCALE -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
    ccversion=''
    gccversion='FreeBSD Clang 18.1.6 (https://github.com/llvm/llvm-project.git llvmorg-18.1.6-0-g1118c2e05e67)'
    gccosandvers=''
    intsize=4
    longsize=8
    ptrsize=8
    doublesize=8
    byteorder=12345678
    doublekind=3
    d_longlong=define
    longlongsize=8
    d_longdbl=define
    longdblsize=16
    longdblkind=1
    ivtype='long'
    ivsize=8
    nvtype='double'
    nvsize=8
    Off_t='off_t'
    lseeksize=8
    alignbytes=8
    prototype=define
  Linker and Libraries:
    ld='cc'
    ldflags ='-Wl,-E  -fstack-protector-strong -L/usr/local/lib'
    libpth=/usr/lib /usr/local/lib /usr/lib/clang/18/lib
    libs=-lpthread -lgdbm -ldl -lm -lcrypt -lutil -lc
    perllibs=-lpthread -ldl -lm -lcrypt -lutil -lc
    libc=
    so=so
    useshrplib=false
    libperl=libperl.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs
    dlext=so
    d_dlsymun=undef
    ccdlflags=' '
    cccdlflags='-DPIC -fPIC'
    lddlflags='-shared  -L/usr/local/lib -fstack-protector-strong'


Characteristics of this binary (from libperl): 
  Compile-time options:
    HAS_LONG_DOUBLE
    HAS_STRTOLD
    HAS_TIMES
    PERLIO_LAYERS
    PERL_COPY_ON_WRITE
    PERL_DONT_CREATE_GVSV
    PERL_HASH_FUNC_SIPHASH13
    PERL_HASH_USE_SBOX32
    PERL_MALLOC_WRAP
    PERL_OP_PARENT
    PERL_PRESERVE_IVUV
    PERL_USE_SAFE_PUTENV
    USE_64_BIT_ALL
    USE_64_BIT_INT
    USE_LARGE_FILES
    USE_LOCALE
    USE_LOCALE_COLLATE
    USE_LOCALE_CTYPE
    USE_LOCALE_NUMERIC
    USE_LOCALE_TIME
    USE_PERLIO
    USE_PERL_ATOF
  Built under freebsd
  Compiled at Jun 10 2024 21:14:04
  %ENV:
    PERL5LIB="/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/arch:/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/lib"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="89199"
    PERL5_CPAN_IS_RUNNING="89199"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="77632,89199"
    PERLDOC="-MPod::Perldoc::ToTextOverstrike"
    PERL_BATCH="yes"
    PERL_CANARY_STABILITY_NOPROMPT="1"
    PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1023/2024092920/cpanreporter_000_config.ini"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    /home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/arch
    /home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-0/blib/lib
    /usr/perl5.40.0/lib/site_perl/5.40.0/aarch64-freebsd
    /usr/perl5.40.0/lib/site_perl/5.40.0
    /usr/perl5.40.0/lib/5.40.0/aarch64-freebsd
    /usr/perl5.40.0/lib/5.40.0
    .