Report for Bio-Biblio-1.70

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From: metabase:user:0d96120c-29e2-11e5-b049-ede3035d37de
Subject: PASS Bio-Biblio-1.70 v5.23.1 Windows (Cygwin)
Date: 2015-08-08T01:34:37Z

This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear carandraug,

This is a computer-generated report for Bio-Biblio-1.70
on perl 5.23.1, created by CPAN-Reporter-1.2014.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 "/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin/perl5.23.1.exe" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok
t/biofetch.t .............. ok
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing
All tests successful.
Files=10, Tests=609, 40 wallclock secs ( 0.05 usr  0.56 sys +  3.54 cusr 10.72 csys = 14.87 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                  Need Have    
    ----------------------- ---- --------
    Bio::Annotation::DBLink 0    0       
    Bio::DB::DBFetch        0    0       
    Bio::Root::IO           0    0       
    Bio::Root::Root         0    0       
    Bio::Root::RootI        0    0       
    Data::Dumper            0    2.158   
    Getopt::Std             0    1.11    
    LWP::Simple             0    6.13    
    parent                  0    0.234   
    SOAP::Lite              0    1.17    
    strict                  0    1.09    
    Symbol                  0    1.07    
    URI::Escape             0    3.31    
    utf8                    0    1.17    
    vars                    0    1.03    
    warnings                0    1.33    
    XML::Parser             0    2.44    
    XML::Twig               0    3.49    

build_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    File::Find              0    1.29    
    File::Spec              0    3.56    
    File::Temp              0    0.2304  
    Test::More              0    1.001014

configure_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    ExtUtils::MakeMaker     6.30 7.04_01 


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    COMSPEC = C:\Windows\system32\cmd.exe
    LANG = en_US.UTF-8
    NONINTERACTIVE_TESTING = 1
    NUMBER_OF_PROCESSORS = 2
    PATH = /home/jmaslak/perl5/perlbrew/bin:/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin:/usr/local/bin:/usr/bin:/cygdrive/c/Windows/system32:/cygdrive/c/Windows:/cygdrive/c/Windows/System32/Wbem:/cygdrive/c/Windows/System32/WindowsPowerShell/v1.0:/cygdrive/c/Strawberry/c/bin:/cygdrive/c/Strawberry/perl/site/bin:/cygdrive/c/Strawberry/perl/bin:/usr/lib/lapack:/usr/sbin:~/perltest/bin
    PERL5LIB = /home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/arch:/home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/lib:/home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/arch:/home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/lib:/home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/arch:/home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/lib:/home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/arch:/home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/lib:/home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/arch:/home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/lib:/home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/arch:/home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/lib:/home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/arch:/home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 10948
    PERL5_CPAN_IS_RUNNING = 10948
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 1240,10948
    PERLBREW_BASHRC_VERSION = 0.73
    PERLBREW_HOME = /home/jmaslak/.perlbrew
    PERLBREW_MANPATH = /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/man
    PERLBREW_PATH = /home/jmaslak/perl5/perlbrew/bin:/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin
    PERLBREW_PERL = perl-5.23.1
    PERLBREW_ROOT = /home/jmaslak/perl5/perlbrew
    PERLBREW_VERSION = 0.73
    PERL_CR_SMOKER_CURRENT = Bio-Biblio-1.70
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_MM_USE_DEFAULT = 1
    PROCESSOR_IDENTIFIER = Intel64 Family 6 Model 63 Stepping 2, GenuineIntel
    SHELL = /bin/bash
    TEMP = /tmp
    TERM = xterm-256color

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin/perl5.23.1
    $UID/$EUID = 197609 / 197609
    $GID = 197121 197121 545
    $EGID = 197121 197121 545

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.11    
    CPAN::Meta          2.150005
    Cwd                 3.56    
    ExtUtils::CBuilder  0.280223
    ExtUtils::Command   1.20    
    ExtUtils::Install   2.04    
    ExtUtils::MakeMaker 7.04_01 
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.28    
    File::Spec          3.56    
    JSON                2.90    
    JSON::PP            2.27300 
    Module::Build       0.4214  
    Module::Signature   n/a     
    Parse::CPAN::Meta   1.4417  
    Test::Harness       3.35    
    Test::More          1.001014
    YAML                1.15    
    YAML::Syck          n/a     
    version             0.9909  


--

Summary of my perl5 (revision 5 version 23 subversion 1) configuration:
   
  Platform:
    osname=cygwin, osvers=2.1.0(0.28753), archname=cygwin-thread-multi
    uname='cygwin_nt-10.0 win-cvlv0hlkdu7 2.1.0(0.28753) 2015-07-14 21:28 x86_64 cygwin '
    config_args='-de -Dprefix=/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1 -Dusedevel -Aeval:scriptdir=/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=define, usemultiplicity=define
    use64bitint=define, use64bitall=define, uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='gcc', ccflags ='-DPERL_USE_SAFE_PUTENV -U__STRICT_ANSI__ -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -D_FORTIFY_SOURCE=2',
    optimize='-O3',
    cppflags='-DPERL_USE_SAFE_PUTENV -U__STRICT_ANSI__ -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong'
    ccversion='', gccversion='4.9.3', gccosandvers=''
    intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678, doublekind=3
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16, longdblkind=3
    ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=8, prototype=define
  Linker and Libraries:
    ld='g++', ldflags =' -Wl,--enable-auto-import -Wl,--export-all-symbols -Wl,--enable-auto-image-base -fstack-protector-strong -L/usr/local/lib'
    libpth=/usr/lib/gcc/x86_64-pc-cygwin/4.9.3/include-fixed /usr/lib /usr/lib/gcc/x86_64-pc-cygwin/4.9.3/../../../../lib/../include/w32api /usr/local/lib /lib
    libs=-lpthread -ldb -ldl -lcrypt
    perllibs=-lpthread -ldl -lcrypt
    libc=/usr/lib/libc.a, so=dll, useshrplib=true, libperl=cygperl5_23_1.dll
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=dll, d_dlsymun=undef, ccdlflags=' '
    cccdlflags=' ', lddlflags=' --shared  -Wl,--enable-auto-import -Wl,--export-all-symbols -Wl,--enable-auto-image-base -L/usr/local/lib -fstack-protector-strong'


Characteristics of this binary (from libperl): 
  Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
                        PERL_COPY_ON_WRITE PERL_DONT_CREATE_GVSV
                        PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
                        PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP
                        PERL_PRESERVE_IVUV PERL_USE_DEVEL
                        PERL_USE_SAFE_PUTENV USE_64_BIT_ALL USE_64_BIT_INT
                        USE_ITHREADS USE_LARGE_FILES USE_LOCALE
                        USE_LOCALE_COLLATE USE_LOCALE_CTYPE
                        USE_LOCALE_NUMERIC USE_LOCALE_TIME USE_PERLIO
                        USE_PERL_ATOF USE_REENTRANT_API
  Locally applied patches:
	Devel::PatchPerl 1.38
  Built under cygwin
  Compiled at Jul 27 2015 22:32:08
  %ENV:
    PERL5LIB="/home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/arch:/home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/lib:/home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/arch:/home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/lib:/home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/arch:/home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/lib:/home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/arch:/home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/lib:/home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/arch:/home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/lib:/home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/arch:/home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/lib:/home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/arch:/home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/lib"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="10948"
    PERL5_CPAN_IS_RUNNING="10948"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="1240,10948"
    PERLBREW_BASHRC_VERSION="0.73"
    PERLBREW_HOME="/home/jmaslak/.perlbrew"
    PERLBREW_MANPATH="/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/man"
    PERLBREW_PATH="/home/jmaslak/perl5/perlbrew/bin:/home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/bin"
    PERLBREW_PERL="perl-5.23.1"
    PERLBREW_ROOT="/home/jmaslak/perl5/perlbrew"
    PERLBREW_VERSION="0.73"
    PERL_CR_SMOKER_CURRENT="Bio-Biblio-1.70"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_MM_USE_DEFAULT="1"
  @INC:
    /home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/arch
    /home/jmaslak/.cpan/build/BioPerl-1.6.924-K351Fg/blib/lib
    /home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/arch
    /home/jmaslak/.cpan/build/Data-Stag-0.14-hiIM5C/blib/lib
    /home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/arch
    /home/jmaslak/.cpan/build/XML-Twig-3.49-JqdvZj/blib/lib
    /home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/arch
    /home/jmaslak/.cpan/build/SOAP-Lite-1.17-NBzd3R/blib/lib
    /home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/arch
    /home/jmaslak/.cpan/build/IO-SessionData-1.03-0gFVZz/blib/lib
    /home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/arch
    /home/jmaslak/.cpan/build/XML-Parser-2.44-sNklCF/blib/lib
    /home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/arch
    /home/jmaslak/.cpan/build/XML-Parser-Lite-0.721-ge_Z3C/blib/lib
    /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/lib/site_perl/5.23.1/cygwin-thread-multi
    /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/lib/site_perl/5.23.1
    /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/lib/5.23.1/cygwin-thread-multi
    /home/jmaslak/perl5/perlbrew/perls/perl-5.23.1/lib/5.23.1
    .