MS v0.207003 Perl 5 v5.38.2 amd64-freebsd
- Status
- Pass
- From
- Slaven Rezić
- Dist
-
MS v0.207003
- Platform
- Perl 5 v5.38.2 amd64-freebsd
- Date
- 2024-09-29 22:59:30
- ID
- 7c776a44-7eb6-11ef-9052-3f3b6e8775ea
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Jeremy Volkening,
This is a computer-generated report for MS-0.207003
on perl 5.38.2, created by CPAN-Reporter-1.2019.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
none provided
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
# Testing MS 0.207003, Perl 5.038002, /usr/perl5.38.2/bin/perl
t/00-load.t ....... ok
t/boilerplate.t ... ok
t/cv.t ............ ok
t/db.t ............ ok
t/imzml.t ......... ok
Undefined elem Qq at t/mass.t line 47.
Undefined brick FooBar at t/mass.t line 52.
Undefined elem Foo at t/mass.t line 54.
t/mass.t .......... ok
t/mgf.t ........... ok
t/ms1.t ........... ok
t/ms2.t ........... ok
t/mzidentml.t ..... ok
t/mzml.t .......... ok
t/mzquantml.t ..... ok
t/mzxml.t ......... ok
Smartmatch is deprecated at t/peptide.t line 66.
Undefined mod Fosfo at /home/cpansand/.cpan/build/2024092921/MS-0.207003-1/blib/lib/MS/Peptide.pm line 225.
t/peptide.t ....... ok
t/pepxml.t ........ ok
t/pod-coverage.t .. ok
t/pod.t ........... ok
t/protein.t ....... ok
t/protxml.t ....... ok
t/search.t ........ ok
t/zz-manifest.t ... skipped: Author tests not required for installation
All tests successful.
Test Summary Report
-------------------
t/boilerplate.t (Wstat: 0 Tests: 3 Failed: 0)
TODO passed: 1-3
Files=21, Tests=429, 19 wallclock secs ( 0.08 usr 0.05 sys + 7.42 cusr 0.76 csys = 8.31 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
----------------- ---- --------
BioX::Seq 0 0.008009
Compress::BGZF 0 0.007001
Data::Lock 0 1.03
File::ShareDir 1.00 1.118
HTTP::Tiny 0 0.088
List::MoreUtils 0 0.430
Module::Pluggable 0 5.2
Net::FTP 0 3.15
PerlIO::gzip 0 0.20
URI 0 5.29
XML::Parser 0 2.47
build_requires:
Module Need Have
----------------- ---- --------
BioX::Seq 0 0.008009
Module::Build 0 0.4234
Test::Fatal 0 0.017
Test::More 0 1.302204
configure_requires:
Module Need Have
----------------- ---- --------
Module::Build 0 0.4234
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
LANG = C.UTF-8
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/freebsd15.0:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
PERL5LIB = /home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/arch:/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/lib:/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/lib:/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/arch:/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 50636
PERL5_CPAN_IS_RUNNING = 50636
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 96138,50636
PERLDOC = -MPod::Perldoc::ToTextOverstrike
PERL_BATCH = yes
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1023/2024092920/cpanreporter_002_config.ini
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/local/bin/zsh
TERM = screen
TMPDIR = /var/tmp/cpansmoker-1023/2024092920
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /usr/perl5.38.2/bin/perl
$UID/$EUID = 1023 / 1023
$GID = 1023 1023
$EGID = 1023 1023
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.37
CPAN::Meta 2.150010
Cwd 3.89
ExtUtils::CBuilder 0.280238
ExtUtils::Command 7.70
ExtUtils::Install 2.22
ExtUtils::MakeMaker 7.70
ExtUtils::Manifest 1.75
ExtUtils::ParseXS 3.51
File::Spec 3.88
JSON 4.10
JSON::PP 4.16
Module::Build 0.4234
Module::Signature 0.88
Parse::CPAN::Meta 2.150010
Test2 1.302204
Test::Harness 3.44
Test::More 1.302204
YAML 1.31
YAML::Syck 1.34
version 0.9933
--
Summary of my perl5 (revision 5 version 38 subversion 2) configuration:
Platform:
osname=freebsd
osvers=15.0-current
archname=amd64-freebsd
uname='freebsd cloud2.bbbike.org 15.0-current freebsd 15.0-current #0 main-5bc10feacc: tue dec 26 13:29:01 utc 2023 root@cloud2.bbbike.org:usrobjhomeprojectsfreebsd-srcamd64.amd64sysgeneric amd64 '
config_args='-ds -e -Dprefix=/usr/perl5.38.2 -Dcf_email=srezic@cpan.org -Doptimize=-O2 -pipe'
hint=recommended
useposix=true
d_sigaction=define
useithreads=undef
usemultiplicity=undef
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
default_inc_excludes_dot=define
Compiler:
cc='cc'
ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
optimize='-O2 -pipe'
cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='FreeBSD Clang 17.0.6 (https://github.com/llvm/llvm-project.git llvmorg-17.0.6-0-g6009708b4367)'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='double'
nvsize=8
Off_t='off_t'
lseeksize=8
alignbytes=8
prototype=define
Linker and Libraries:
ld='cc'
ldflags ='-Wl,-E -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/lib /usr/local/lib /usr/lib/clang/17/lib
libs=-lpthread -lgdbm -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -ldl -lm -lcrypt -lutil -lc
libc=
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags=' '
cccdlflags='-DPIC -fPIC'
lddlflags='-shared -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
HAS_LONG_DOUBLE
HAS_STRTOLD
HAS_TIMES
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_SIPHASH13
PERL_HASH_USE_SBOX32
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
PERL_USE_SAFE_PUTENV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
Built under freebsd
Compiled at Dec 26 2023 16:19:55
%ENV:
PERL5LIB="/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/arch:/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/lib:/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/lib:/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/arch:/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/lib:/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/arch:/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="50636"
PERL5_CPAN_IS_RUNNING="50636"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="96138,50636"
PERLDOC="-MPod::Perldoc::ToTextOverstrike"
PERL_BATCH="yes"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1023/2024092920/cpanreporter_002_config.ini"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_USE_UNSAFE_INC="1"
@INC:
/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/arch
/home/cpansand/.cpan/build/2024092921/Data-Lock-1.03-2/blib/lib
/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/arch
/home/cpansand/.cpan/build/2024092921/Search-QS-0.04-1/blib/lib
/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/arch
/home/cpansand/.cpan/build/2024092921/Set-Array-0.30-1/blib/lib
/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/arch
/home/cpansand/.cpan/build/2024092921/Mir-FileHandler-0.05-1/blib/lib
/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/arch
/home/cpansand/.cpan/build/2024092921/libconfig-yaarg-perl-0.023-1/blib/lib
/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/arch
/home/cpansand/.cpan/build/2024092921/Acme-Given-Hash-0.007-1/blib/lib
/usr/perl5.38.2/lib/site_perl/5.38.2/amd64-freebsd
/usr/perl5.38.2/lib/site_perl/5.38.2
/usr/perl5.38.2/lib/5.38.2/amd64-freebsd
/usr/perl5.38.2/lib/5.38.2
.