BioPerl v1.7.3 Perl 5 v5.8.1 x86_64-linux
- Status
- Fail
- From
- Slaven Rezić (SREZIC)
- Dist
-
BioPerl v1.7.3
- Platform
- Perl 5 v5.8.1 x86_64-linux
- Date
- 2019-01-30 23:12:47
- ID
- 8e53faf2-24e4-11e9-a8e9-dd2c8e9c9d45
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear carandraug,
This is a computer-generated report for BioPerl-1.7.3
on perl 5.8.1, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
none provided
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/bbbike/perl-5.8.1/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/Align/*.t t/AlignIO/*.t t/Annotation/*.t t/LocalDB/*.t t/LocalDB/Index/*.t t/LocalDB/Taxonomy/*.t t/Matrix/*.t t/Matrix/IO/*.t t/Ontology/*.t t/Ontology/IO/*.t t/RemoteDB/*.t t/Root/*.t t/SearchIO/*.t t/SearchIO/Writer/*.t t/Seq/*.t t/SeqFeature/*.t t/SeqIO/*.t t/SeqTools/*.t t/Tools/*.t t/Tools/Alignment/*.t t/Tools/EMBOSS/*.t t/Tools/Phylo/*.t t/Tools/Phylo/Phylip/*.t t/Tools/Signalp/*.t t/Tools/Spidey/*.t t/Tree/*.t t/Tree/TreeIO/*.t
t/00-compile.t ...................... ok
t/Align/AlignStats.t ................ ok
t/Align/AlignUtil.t ................. ok
t/Align/SimpleAlign.t ............... ok
t/Align/TreeBuild.t ................. ok
t/Align/Utilities.t ................. ok
t/AlignIO/AlignIO.t ................. ok
t/AlignIO/arp.t ..................... ok
t/AlignIO/bl2seq.t .................. ok
t/AlignIO/clustalw.t ................ ok
t/AlignIO/emboss.t .................. ok
t/AlignIO/fasta.t ................... ok
t/AlignIO/largemultifasta.t ......... ok
t/AlignIO/maf.t ..................... ok
t/AlignIO/mase.t .................... ok
t/AlignIO/mega.t .................... ok
t/AlignIO/meme.t .................... ok
t/AlignIO/metafasta.t ............... ok
t/AlignIO/msf.t ..................... ok
t/AlignIO/nexus.t ................... ok
t/AlignIO/pfam.t .................... ok
t/AlignIO/phylip.t .................. ok
t/AlignIO/po.t ...................... ok
t/AlignIO/prodom.t .................. ok
t/AlignIO/psi.t ..................... ok
t/AlignIO/selex.t ................... ok
t/AlignIO/xmfa.t .................... ok
t/Alphabet.t ........................ ok
t/Annotation/Annotation.t ........... ok
t/Annotation/AnnotationAdaptor.t .... ok
t/author-mojibake.t ................. skipped: these tests are for testing by the author
t/author-pod-syntax.t ............... skipped: these tests are for testing by the author
t/LocalDB/Fasta.t ................... ok
t/LocalDB/Flat.t .................... ok
t/LocalDB/Index/Blast.t ............. ok
t/LocalDB/Index/BlastTable.t ........ ok
t/LocalDB/Index/Index.t ............. ok
t/LocalDB/Qual.t .................... ok
--------------------- WARNING ---------------------
MSG: Couldn't load Bio::DB::BioFetch
---------------------------------------------------
--------------------- WARNING ---------------------
MSG: Couldn't load Bio::DB::BioFetch
---------------------------------------------------
t/LocalDB/Registry.t ................ ok
t/LocalDB/Taxonomy/greengenes.t ..... ok
t/LocalDB/Taxonomy/silva.t .......... ok
t/Matrix/InstanceSite.t ............. ok
t/Matrix/IO/masta.t ................. ok
t/Matrix/IO/psm.t ................... ok
t/Matrix/Matrix.t ................... ok
t/Matrix/ProtMatrix.t ............... ok
t/Matrix/ProtPsm.t .................. ok
t/Matrix/SiteMatrix.t ............... ok
t/Ontology/GOterm.t ................. ok
t/Ontology/GraphAdaptor.t ........... ok
t/Ontology/IO/go.t .................. ok
t/Ontology/IO/interpro.t ............ ok
t/Ontology/IO/obo.t ................. ok
t/Ontology/Ontology.t ............... ok
t/Ontology/OntologyEngine.t ......... ok
t/Ontology/OntologyStore.t .......... ok
t/Ontology/Relationship.t ........... ok
t/Ontology/RelationshipType.t ....... ok
t/Ontology/Term.t ................... ok
t/RemoteDB/SeqRead_fail.t ........... ok
BDB0506 call implies an access method which is inconsistent with previous calls
BDB0506 call implies an access method which is inconsistent with previous calls
BDB0635 DB_CREATE must be specified to create databases.
------------- EXCEPTION: Bio::Root::Exception -------------
MSG: No such file or directory /var/tmp/cpansmoker-1023/2019013022/nodes
STACK: Error::throw
STACK: Bio::Root::Root::throw /tmpfs/.cpan-build-cpansand/2019013022/BioPerl-1.7.3-3FZh2P/blib/lib/Bio/Root/Root.pm:445
STACK: Bio::DB::Taxonomy::flatfile::_db_connect /tmpfs/.cpan-build-cpansand/2019013022/BioPerl-1.7.3-3FZh2P/blib/lib/Bio/DB/Taxonomy/flatfile.pm:491
STACK: Bio::DB::Taxonomy::flatfile::new /tmpfs/.cpan-build-cpansand/2019013022/BioPerl-1.7.3-3FZh2P/blib/lib/Bio/DB/Taxonomy/flatfile.pm:145
STACK: Bio::DB::Taxonomy::new /tmpfs/.cpan-build-cpansand/2019013022/BioPerl-1.7.3-3FZh2P/blib/lib/Bio/DB/Taxonomy.pm:120
STACK: t/RemoteDB/Taxonomy.t:23
-----------------------------------------------------------
# Looks like your test exited with 2 just after 2.
t/RemoteDB/Taxonomy.t ...............
Dubious, test returned 2 (wstat 512, 0x200)
Failed 150/152 subtests
t/Root/Exception.t .................. ok
t/Root/HTTPget.t .................... ok
t/Root/IO.t ......................... ok
t/Root/RootI.t ...................... ok
t/Root/RootIO.t ..................... ok
t/Root/Storable.t ................... ok
t/Root/Utilities.t .................. ok
t/SearchIO/axt.t .................... ok
t/SearchIO/blast.t .................. ok
t/SearchIO/blast_pull.t ............. ok
t/SearchIO/blasttable.t ............. ok
t/SearchIO/CigarString.t ............ ok
t/SearchIO/cross_match.t ............ ok
t/SearchIO/erpin.t .................. ok
t/SearchIO/exonerate.t .............. ok
t/SearchIO/fasta.t .................. ok
t/SearchIO/gmap_f9.t ................ ok
t/SearchIO/infernal.t ............... ok
t/SearchIO/megablast.t .............. ok
t/SearchIO/psl.t .................... ok
t/SearchIO/rnamotif.t ............... ok
t/SearchIO/SearchIO.t ............... ok
t/SearchIO/sim4.t ................... ok
t/SearchIO/SimilarityPair.t ......... ok
t/SearchIO/Tiling.t ................. ok
t/SearchIO/waba.t ................... ok
t/SearchIO/wise.t ................... ok
t/SearchIO/Writer/GbrowseGFF.t ...... ok
t/SearchIO/Writer/HitTableWriter.t .. ok
t/SearchIO/Writer/HSPTableWriter.t .. ok
t/SearchIO/Writer/HTMLWriter.t ...... ok
t/SearchIO/Writer/TextWriter.t ...... ok
t/Seq/DBLink.t ...................... ok
t/Seq/EncodedSeq.t .................. ok
t/Seq/LargeLocatableSeq.t ........... ok
t/Seq/LargePSeq.t ................... ok
t/Seq/LocatableSeq.t ................ ok
t/Seq/MetaSeq.t ..................... ok
t/Seq/PrimaryQual.t ................. ok
t/Seq/PrimarySeq.t .................. ok
t/Seq/PrimedSeq.t ................... ok
t/Seq/Quality.t ..................... ok
t/Seq/Seq.t ......................... ok
t/Seq/SimulatedRead.t ............... ok
t/Seq/WithQuality.t ................. ok
t/SeqFeature/Amplicon.t ............. ok
t/SeqFeature/Clone.t ................ ok
BDB0004 fop_read_meta: /var/tmp/cpansmoker-1023/2019013022/ilwsIDO7y0: unexpected file type or format
t/SeqFeature/Collection.t ........... ok
t/SeqFeature/Computation.t .......... ok
t/SeqFeature/FeaturePair.t .......... ok
t/SeqFeature/Gene.t ................. ok
t/SeqFeature/Generic.t .............. ok
t/SeqFeature/Location.t ............. ok
t/SeqFeature/LocationFactory.t ...... ok
t/SeqFeature/Primer.t ............... ok
t/SeqFeature/Range.t ................ ok
t/SeqFeature/RangeI.t ............... ok
t/SeqFeature/SeqAnalysisParser.t .... ok
t/SeqFeature/SubSeq.t ............... ok
t/SeqFeature/Unflattener.t .......... ok
t/SeqIO/ace.t ....................... ok
t/SeqIO/asciitree.t ................. ok
t/SeqIO/bsml.t ...................... ok
t/SeqIO/bsml_sax.t .................. ok
t/SeqIO/embl.t ...................... ok
t/SeqIO/fasta.t ..................... ok
t/SeqIO/fastq.t ..................... ok
t/SeqIO/game.t ...................... ok
t/SeqIO/gbxml.t ..................... ok
t/SeqIO/gcg.t ....................... ok
t/SeqIO/genbank.t ................... ok
t/SeqIO/Handler.t ................... ok
t/SeqIO/interpro.t .................. ok
t/SeqIO/kegg.t ...................... ok
t/SeqIO/largefasta.t ................ ok
t/SeqIO/locuslink.t ................. ok
t/SeqIO/mbsout.t .................... ok
t/SeqIO/metafasta.t ................. ok
t/SeqIO/msout.t ..................... ok
t/SeqIO/MultiFile.t ................. ok
t/SeqIO/Multiple_fasta.t ............ ok
t/SeqIO/phd.t ....................... ok
t/SeqIO/pir.t ....................... ok
t/SeqIO/qual.t ...................... ok
t/SeqIO/raw.t ....................... ok
t/SeqIO/scf.t ....................... ok
t/SeqIO/SeqBuilder.t ................ ok
t/SeqIO/SeqIO.t ..................... ok
t/SeqIO/seqxml.t .................... ok
t/SeqIO/Splicedseq.t ................ ok
t/SeqIO/swiss.t ..................... ok
t/SeqIO/tab.t ....................... ok
t/SeqIO/table.t ..................... ok
t/SeqIO/tigr.t ...................... ok
t/SeqIO/tigrxml.t ................... ok
t/SeqIO/tinyseq.t ................... ok
t/SeqTools/Backtranslate.t .......... ok
t/SeqTools/CodonTable.t ............. ok
t/SeqTools/ECnumber.t ............... ok
t/SeqTools/GuessSeqFormat.t ......... ok
t/SeqTools/OddCodes.t ............... ok
t/SeqTools/SeqPattern.t ............. ok
t/SeqTools/SeqStats.t ............... ok
--------------------- WARNING ---------------------
MSG: Providing an array of features to Bio::Seq add_SeqFeature() is deprecated and will be removed in a future version. Add a single feature at a time instead.
To be removed in 1.9.
---------------------------------------------------
t/SeqTools/SeqUtils.t ............... ok
t/SeqTools/SeqWords.t ............... ok
t/Species.t ......................... ok
t/Symbol.t .......................... ok
t/Tools/Alignment/Consed.t .......... ok
t/Tools/AmpliconSearch.t ............ ok
t/Tools/EMBOSS/Palindrome.t ......... ok
t/Tools/ePCR.t ...................... ok
t/Tools/Est2Genome.t ................ ok
t/Tools/FootPrinter.t ............... ok
t/Tools/Geneid.t .................... ok
t/Tools/Genewise.t .................. ok
t/Tools/Genomewise.t ................ ok
t/Tools/Genpred.t ................... ok
t/Tools/GFF.t ....................... ok
t/Tools/IUPAC.t ..................... ok
t/Tools/Lucy.t ...................... ok
t/Tools/Match.t ..................... ok
t/Tools/Phylo/Gerp.t ................ ok
t/Tools/Phylo/Molphy.t .............. ok
t/Tools/Phylo/Phylip/ProtDist.t ..... ok
t/Tools/pICalculator.t .............. ok
t/Tools/Primer3.t ................... ok
t/Tools/Promoterwise.t .............. ok
t/Tools/PrositeScan.t ............... ok
t/Tools/Pseudowise.t ................ ok
t/Tools/QRNA.t ...................... ok
t/Tools/RandDistFunctions.t ......... ok
t/Tools/RepeatMasker.t .............. ok
t/Tools/Seg.t ....................... ok
t/Tools/Sigcleave.t ................. ok
t/Tools/Signalp.t ................... ok
t/Tools/Signalp/ExtendedSignalp.t ... ok
t/Tools/Sim4.t ...................... ok
t/Tools/Spidey/Spidey.t ............. ok
t/Tools/TandemRepeatsFinder.t ....... ok
t/Tools/TargetP.t ................... ok
t/Tools/Tmhmm.t ..................... ok
t/Tools/tRNAscanSE.t ................ ok
t/Tree/Compatible.t ................. ok
t/Tree/Node.t ....................... ok
t/Tree/RandomTreeFactory.t .......... ok
t/Tree/Tree.t ....................... ok
t/Tree/TreeIO.t ..................... ok
t/Tree/TreeIO/lintree.t ............. ok
t/Tree/TreeIO/newick.t .............. ok
t/Tree/TreeIO/nexus.t ............... ok
t/Tree/TreeIO/nhx.t ................. ok
t/Tree/TreeIO/phyloxml.t ............ ok
t/Tree/TreeIO/tabtree.t ............. ok
t/Tree/TreeStatistics.t ............. ok
Test Summary Report
-------------------
t/RemoteDB/Taxonomy.t (Wstat: 512 Tests: 2 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 152 tests but ran 2.
Files=215, Tests=14864, 82 wallclock secs ( 0.94 usr 1.29 sys + 50.33 cusr 27.08 csys = 79.64 CPU)
Result: FAIL
Failed 1/215 test programs. 0/14864 subtests failed.
Makefile:3345: recipe for target 'test_dynamic' failed
make: *** [test_dynamic] Error 255
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
---------------------- ----- ----------
AnyDBM_File 0 1.00
base 0 2.23
Carp 0 1.38
constant 0 1.04
Cwd 0 3.62
Data::Dumper 0 2.161
Data::Stag 0 0.14
DB_File 0 1.806
DBI 0 1.636
Digest::MD5 0 2.27
Dumpvalue 0 1.11
Env 0 1.00
Error 0 0.17027
Exporter 0 5.72
Fcntl 0 1.05
File::Basename 0 2.72
File::Copy 0 2.06
File::Path 0 2.12
File::Spec 0 3.62
File::Spec::Functions 0 3.62
File::Temp 0 0.2304
FileHandle 0 2.01
GD 0 2.70
Getopt::Long 0 2.49
Graph::Directed 0 0
HTTP::Request::Common 0 6.11
HTTP::Response 0 6.11
integer 0 1.00
IO::File 0 1.14
IO::Handle 0 1.28
IO::Pipe 0 1.13
IO::Scalar 0 2.111
IO::Socket 0 1.31
IO::String 0 1.08
IPC::Run 0 20180523.0
List::MoreUtils 0 0.416
List::Util 0 1.45
LWP::UserAgent 0 6.15
Math::BigFloat 0 1.999726
Module::Build 0 0.4218
overload 0 1.01
parent 0 0.234
perl 5.006 5.008001
Pod::Usage 0 1.69
POSIX 0 1.06
Scalar::Util 0 1.45
Set::Scalar 0 1.29
Storable 0 2.51
strict 0 1.03
Symbol 0 1.05
Test::Builder 0 1.302056
Test::Builder::Module 0 1.302056
Test::Most 0 0.35
Test::RequiresInternet 0 0.05
Text::Balanced 0 1.95
Text::Wrap 0 2001.09291
Tie::Handle 0 4.1
Tie::RefHash 0 1.39
Time::HiRes 0 1.9739
UNIVERSAL 0 1.01
URI 0 1.71
utf8 0 1.02
vars 0 1.01
version 0 0.9916
warnings 0 1.03
XML::DOM 0 1.46
XML::DOM::XPath 0 0.14
XML::LibXML 0 2.0132
XML::LibXML::Reader 0 2.0132
XML::Parser::PerlSAX 0 0.08
XML::SAX 0 1.00
XML::SAX::Base 0 1.09
XML::SAX::Writer 0 0.57
XML::Twig 0 3.52
XML::Writer 0 0.625
YAML 0 1.15
build_requires:
Module Need Have
---------------------- ----- ----------
ExtUtils::MakeMaker 0 7.16
File::Spec 0 3.62
IO::Handle 0 1.28
IPC::Open3 0 1.0105
Test::Memory::Cycle 0 1.06
Test::More 0 1.302056
Test::Weaken 0 3.022000
configure_requires:
Module Need Have
---------------------- ----- ----------
ExtUtils::MakeMaker 0 7.16
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
LANG = C
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/linux-gnu:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
PERL5LIB = /home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/arch:/home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/lib:/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/arch:/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/lib:/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/arch:/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/lib:/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/arch:/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/lib:/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/arch:/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/lib:/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/arch:/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/lib:/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/arch:/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/lib:/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/arch:/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Parser-2.44-LV8Alt/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Parser-2.44-LV8Alt/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Memory-Cycle-1.06-Bfa1pO/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Memory-Cycle-1.06-Bfa1pO/blib/lib:/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/arch:/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-1.00-v2PxDr/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-1.00-v2PxDr/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/lib:/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/arch:/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 28027
PERL5_CPAN_IS_RUNNING = 28027
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 28012,28027
PERLDOC = -MPod::Perldoc::ToTextOverstrike
PERL_BATCH = yes
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1023/2019013022/cpanreporter_000_config.ini
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
SHELL = /bin/zsh
TERM = screen
TMPDIR = /var/tmp/cpansmoker-1023/2019013022
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /bbbike/perl-5.8.1/bin/perl
$UID/$EUID = 1023 / 1023
$GID = 1023 1023
$EGID = 1023 1023
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.10
CPAN::Meta 2.143240
Cwd 3.62
ExtUtils::CBuilder 0.280224
ExtUtils::Command 7.16
ExtUtils::Install 1.54
ExtUtils::MakeMaker 7.16
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.30
File::Spec 3.62
JSON 2.90
JSON::PP 2.27400
Module::Build 0.4218
Module::Signature n/a
Parse::CPAN::Meta 1.4422
Test::Harness 3.36
Test::More 1.302056
YAML 1.15
YAML::Syck 1.29
version 0.9916
--
Summary of my perl5 (revision 5.0 version 8 subversion 1) configuration:
Platform:
osname=linux, osvers=3.16.0-4-amd64, archname=x86_64-linux
uname='linux eserte 3.16.0-4-amd64 #1 smp debian 3.16.7-ckt25-2 (2016-04-08) x86_64 gnulinux '
config_args='-ds -e -Dprefix=/opt/perl-5.8.1 -Dcf_email=srezic@cpan.org'
hint=recommended, useposix=true, d_sigaction=define
usethreads=undef use5005threads=undef useithreads=undef usemultiplicity=undef
useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
use64bitint=define use64bitall=define uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fno-strict-aliasing -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fno-strict-aliasing -I/usr/local/include'
ccversion='', gccversion='4.9.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -L/usr/local/lib'
libpth=/usr/local/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib /usr/lib
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
libc=libc-2.19.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.19'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-rdynamic'
cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'
Characteristics of this binary (from libperl):
Compile-time options: USE_64_BIT_INT USE_64_BIT_ALL USE_LARGE_FILES
Locally applied patches:
Devel::PatchPerl 1.42
Built under linux
Compiled at May 8 2016 18:17:48
%ENV:
PERL5LIB="/home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/arch:/home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/lib:/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/arch:/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/lib:/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/arch:/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/lib:/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/arch:/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/lib:/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/arch:/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/lib:/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/arch:/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/lib:/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/arch:/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/lib:/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/arch:/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-Parser-2.44-LV8Alt/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-Parser-2.44-LV8Alt/blib/lib:/home/cpansand/.cpan/build/2019013022/Test-Memory-Cycle-1.06-Bfa1pO/blib/arch:/home/cpansand/.cpan/build/2019013022/Test-Memory-Cycle-1.06-Bfa1pO/blib/lib:/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/arch:/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-1.00-v2PxDr/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-1.00-v2PxDr/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/lib:/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/arch:/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/lib:/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/arch:/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="28027"
PERL5_CPAN_IS_RUNNING="28027"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="28012,28027"
PERLDOC="-MPod::Perldoc::ToTextOverstrike"
PERL_BATCH="yes"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1023/2019013022/cpanreporter_000_config.ini"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
@INC:
/home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/arch
/home/cpansand/.cpan/build/2019013022/GD-2.70-O6l3Xi/blib/lib
/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/arch
/home/cpansand/.cpan/build/2019013022/Test-Fork-0.02-oqMdmm/blib/lib
/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/arch
/home/cpansand/.cpan/build/2019013022/ExtUtils-PkgConfig-1.16-FxEW6Q/blib/lib
/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/arch
/home/cpansand/.cpan/build/2019013022/Error-0.17027-HpbfpD/blib/lib
/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/arch
/home/cpansand/.cpan/build/2019013022/Set-Scalar-1.29-qi9Sj_/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-Twig-3.52-PlQZcJ/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-SAX-Writer-0.57-Y82eWw/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-Filter-BufferText-1.01-Ph7asJ/blib/lib
/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/arch
/home/cpansand/.cpan/build/2019013022/Test-Weaken-3.022000-skh6iL/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-Writer-0.625-JBky9C/blib/lib
/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/arch
/home/cpansand/.cpan/build/2019013022/Data-Stag-0.14-idqw8K/blib/lib
/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/arch
/home/cpansand/.cpan/build/2019013022/IO-String-1.08-fScTzS/blib/lib
/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/arch
/home/cpansand/.cpan/build/2019013022/Test-Most-0.35-5Bn12v/blib/lib
/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/arch
/home/cpansand/.cpan/build/2019013022/Graph-0.9704-qZmf5Z/blib/lib
/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/arch
/home/cpansand/.cpan/build/2019013022/Test-RequiresInternet-0.05-oC8dAF/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-LibXML-2.0132-5PQkFF/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-DOM-XPath-0.14-cr0bMw/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-XPathEngine-0.14-WhM4bU/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-DOM-1.46-hgppRz/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-RegExp-0.04-_ocqdF/blib/lib
/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/arch
/home/cpansand/.cpan/build/2019013022/libxml-perl-0.08-S4V9zB/blib/lib
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/home/cpansand/.cpan/build/2019013022/Test-Memory-Cycle-1.06-Bfa1pO/blib/arch
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/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/arch
/home/cpansand/.cpan/build/2019013022/Devel-Cycle-1.12-vgL3P0/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-SAX-1.00-v2PxDr/blib/arch
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/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-SAX-Base-1.09-27MZmI/blib/lib
/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/arch
/home/cpansand/.cpan/build/2019013022/XML-NamespaceSupport-1.12-hlssal/blib/lib
/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/arch
/home/cpansand/.cpan/build/2019013022/IPC-Run-20180523.0-KofrZU/blib/lib
/opt/perl-5.8.1/lib/5.8.1/x86_64-linux
/opt/perl-5.8.1/lib/5.8.1
/opt/perl-5.8.1/lib/site_perl/5.8.1/x86_64-linux
/opt/perl-5.8.1/lib/site_perl/5.8.1
/opt/perl-5.8.1/lib/site_perl
.