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From: metabase:user:0d96120c-29e2-11e5-b049-ede3035d37de
Subject: PASS Bio-Biblio-1.70 v5.23.0 GNU/Linux
Date: 2015-07-18T01:38:21Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear carandraug,
This is a computer-generated report for Bio-Biblio-1.70
on perl 5.23.0, created by CPAN-Reporter-1.2014.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/data/perl5/perlbrew/perls/perl-5.23.0/bin/perl5.23.0" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok
t/biofetch.t .............. ok
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing
All tests successful.
Files=10, Tests=609, 7 wallclock secs ( 0.07 usr 0.01 sys + 1.66 cusr 0.51 csys = 2.25 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
----------------------- ---- --------
Bio::Annotation::DBLink 0 0
Bio::DB::DBFetch 0 0
Bio::Root::IO 0 0
Bio::Root::Root 0 0
Bio::Root::RootI 0 0
Data::Dumper 0 2.158
Getopt::Std 0 1.11
LWP::Simple 0 6.13
parent 0 0.234
SOAP::Lite 0 1.14
strict 0 1.09
Symbol 0 1.07
URI::Escape 0 3.31
utf8 0 1.17
vars 0 1.03
warnings 0 1.32
XML::Parser 0 2.44
XML::Twig 0 3.49
build_requires:
Module Need Have
----------------------- ---- --------
File::Find 0 1.29
File::Spec 0 3.56
File::Temp 0 0.2304
Test::More 0 1.001014
configure_requires:
Module Need Have
----------------------- ---- --------
ExtUtils::MakeMaker 6.30 7.04_01
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
NONINTERACTIVE_TESTING = 1
PATH = /home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.23.0/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
PERL5LIB = /home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/arch:/home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/lib:/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/arch:/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/lib:/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/arch:/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/lib:/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/arch:/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/lib:/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/arch:/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/lib:/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/arch:/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/lib:/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/arch:/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/lib:/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/arch:/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/lib:/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/arch:/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/lib:/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/arch:/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/lib:/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/arch:/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/lib:/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/arch:/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/lib:/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/arch:/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/lib:/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/arch:/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/lib:/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/arch:/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/lib:/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/arch:/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/lib:/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/arch:/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/lib:/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/arch:/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/lib:/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/arch:/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/lib:/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/arch:/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/lib:/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/arch:/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/lib:/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/arch:/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/lib:/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/arch:/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/lib:/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/arch:/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 13750
PERL5_CPAN_IS_RUNNING = 13750
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 13621,13750
PERLBREW_BASHRC_VERSION = 0.73
PERLBREW_HOME = /home/perltest/.perlbrew
PERLBREW_MANPATH = /home/perltest/perl5/perlbrew/perls/perl-5.23.0/man
PERLBREW_PATH = /home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.23.0/bin
PERLBREW_PERL = perl-5.23.0
PERLBREW_ROOT = /home/perltest/perl5/perlbrew
PERLBREW_VERSION = 0.73
PERL_CR_SMOKER_CURRENT = Bio-Biblio-1.70
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /data/perl5/perlbrew/perls/perl-5.23.0/bin/perl5.23.0
$UID/$EUID = 2000 / 2000
$GID = 2000 2000
$EGID = 2000 2000
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.11
CPAN::Meta 2.150005
Cwd 3.56
ExtUtils::CBuilder 0.280223
ExtUtils::Command 1.20
ExtUtils::Install 2.04
ExtUtils::MakeMaker 7.04_01
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.28
File::Spec 3.56
JSON 2.90
JSON::PP 2.27300
Module::Build 0.4214
Module::Signature 0.79
Parse::CPAN::Meta 1.4417
Test::Harness 3.35
Test::More 1.001014
YAML 1.15
YAML::Syck 1.29
version 0.9909
--
Summary of my perl5 (revision 5 version 23 subversion 0) configuration:
Platform:
osname=linux, osvers=3.19.0-18-generic, archname=x86_64-linux
uname='linux perltest 3.19.0-18-generic #18-ubuntu smp tue may 19 18:31:35 utc 2015 x86_64 x86_64 x86_64 gnulinux '
config_args='-de -Dprefix=/home/perltest/perl5/perlbrew/perls/perl-5.23.0 -Dusedevel -Aeval:scriptdir=/home/perltest/perl5/perlbrew/perls/perl-5.23.0/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion='', gccversion='4.9.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678, doublekind=3
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16, longdblkind=3
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/4.9/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.21.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.21'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
PERL_USE_DEVEL USE_64_BIT_ALL USE_64_BIT_INT
USE_LARGE_FILES USE_LOCALE USE_LOCALE_COLLATE
USE_LOCALE_CTYPE USE_LOCALE_NUMERIC USE_LOCALE_TIME
USE_PERLIO USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.38
Built under linux
Compiled at Jul 14 2015 18:20:06
%ENV:
PERL5LIB="/home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/arch:/home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/lib:/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/arch:/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/lib:/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/arch:/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/lib:/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/arch:/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/lib:/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/arch:/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/lib:/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/arch:/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/lib:/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/arch:/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/lib:/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/arch:/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/lib:/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/arch:/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/lib:/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/arch:/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/lib:/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/arch:/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/lib:/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/arch:/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/lib:/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/arch:/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/lib:/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/arch:/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/lib:/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/arch:/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/lib:/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/arch:/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/lib:/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/arch:/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/lib:/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/arch:/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/lib:/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/arch:/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/lib:/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/arch:/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/lib:/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/arch:/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/lib:/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/arch:/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/lib:/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/arch:/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/lib:/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/arch:/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="13750"
PERL5_CPAN_IS_RUNNING="13750"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="13621,13750"
PERLBREW_BASHRC_VERSION="0.73"
PERLBREW_HOME="/home/perltest/.perlbrew"
PERLBREW_MANPATH="/home/perltest/perl5/perlbrew/perls/perl-5.23.0/man"
PERLBREW_PATH="/home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.23.0/bin"
PERLBREW_PERL="perl-5.23.0"
PERLBREW_ROOT="/home/perltest/perl5/perlbrew"
PERLBREW_VERSION="0.73"
PERL_CR_SMOKER_CURRENT="Bio-Biblio-1.70"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/arch
/home/perltest/.cpan/build/PostScript-0.06-G5i8fr/blib/lib
/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/arch
/home/perltest/.cpan/build/SWF-Builder-0.16-wEmvpR/blib/lib
/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/arch
/home/perltest/.cpan/build/SWF-File-0.42-cB_hZK/blib/lib
/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/arch
/home/perltest/.cpan/build/Data-TemporaryBag-0.09-BMR4Tx/blib/lib
/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/arch
/home/perltest/.cpan/build/XML-Twig-3.49-3tM1pz/blib/lib
/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/arch
/home/perltest/.cpan/build/Math-Random-0.71-pSEy4X/blib/lib
/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/arch
/home/perltest/.cpan/build/XML-XML2JSON-0.06-FYSQ3V/blib/lib
/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/arch
/home/perltest/.cpan/build/PDF-API2-2.023-Mihmii/blib/lib
/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/arch
/home/perltest/.cpan/build/Font-TTF-1.05-ohjhdh/blib/lib
/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/arch
/home/perltest/.cpan/build/Math-CDF-0.1-t4b7ap/blib/lib
/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/arch
/home/perltest/.cpan/build/Bio-Phylo-0.58-1SRmL1/blib/lib
/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/arch
/home/perltest/.cpan/build/SVG-Graph-0.02-ENt7dB/blib/lib
/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/arch
/home/perltest/.cpan/build/SVG-2.64-m4jl4e/blib/lib
/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/arch
/home/perltest/.cpan/build/Tree-DAG_Node-1.27-7R5fan/blib/lib
/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/arch
/home/perltest/.cpan/build/Statistics-Descriptive-3.0609-R6G6bt/blib/lib
/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/arch
/home/perltest/.cpan/build/Math-Spline-0.02-Tz0LuN/blib/lib
/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/arch
/home/perltest/.cpan/build/Math-Derivative-0.04-XRwTsM/blib/lib
/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/arch
/home/perltest/.cpan/build/Algorithm-Munkres-0.08-_sO21C/blib/lib
/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/arch
/home/perltest/.cpan/build/Array-Compare-2.11-3uWOl5/blib/lib
/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/arch
/home/perltest/.cpan/build/HTML-TableExtract-2.13-cSrmUJ/blib/lib
/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/arch
/home/perltest/.cpan/build/XML-DOM-XPath-0.14-ywN3rk/blib/lib
/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/arch
/home/perltest/.cpan/build/XML-XPathEngine-0.14-mXjDCJ/blib/lib
/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/arch
/home/perltest/.cpan/build/BioPerl-1.6.924-raWp6X/blib/lib
/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/arch
/home/perltest/.cpan/build/Data-Stag-0.14-vfNx_t/blib/lib
/home/perltest/perl5/perlbrew/perls/perl-5.23.0/lib/site_perl/5.23.0/x86_64-linux
/home/perltest/perl5/perlbrew/perls/perl-5.23.0/lib/site_perl/5.23.0
/home/perltest/perl5/perlbrew/perls/perl-5.23.0/lib/5.23.0/x86_64-linux
/home/perltest/perl5/perlbrew/perls/perl-5.23.0/lib/5.23.0
.