BioPerl v1.7.6 Perl 5 v5.12.5 i86pc-solaris
- Status
- Fail
- From
- Nigel Horne
- Dist
-
BioPerl v1.7.6
- Platform
- Perl 5 v5.12.5 i86pc-solaris
- Date
- 2019-11-30 15:04:26
- ID
- b3968d2e-1382-11ea-a63c-df735306f5b4
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear carandraug,
This is a computer-generated report for BioPerl-1.7.6
on perl 5.12.5, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/Align/*.t t/AlignIO/*.t t/Annotation/*.t t/LocalDB/*.t t/LocalDB/Index/*.t t/LocalDB/Taxonomy/*.t t/Matrix/*.t t/Matrix/IO/*.t t/Ontology/*.t t/Ontology/IO/*.t t/RemoteDB/*.t t/Root/*.t t/SearchIO/*.t t/SearchIO/Writer/*.t t/Seq/*.t t/SeqFeature/*.t t/SeqIO/*.t t/SeqTools/*.t t/Tools/*.t t/Tools/Alignment/*.t t/Tools/EMBOSS/*.t t/Tools/Phylo/*.t t/Tools/Phylo/Phylip/*.t t/Tools/Signalp/*.t t/Tools/Spidey/*.t t/Tree/*.t t/Tree/TreeIO/*.t
# Failed test 'bin/bp_chaos_plot compiled ok'
# at t/00-compile.t line 589.
# got: '512'
# expected: '0'
Can't locate GD.pm in @INC (@INC contains: /export/home/njh/.cpan/build/BioPerl-1.7.6-2/blib/arch /export/home/njh/.cpan/build/BioPerl-1.7.6-2/blib/lib /export/home/njh/.cpan/build/BioPerl-1.7.6-2/blib/lib /export/home/njh/.cpan/build/BioPerl-1.7.6-2/blib/arch /export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/arch /export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/lib /export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/arch /export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/lib /export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/arch /export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/lib /export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/arch /export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/lib /export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/arch /export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/lib /export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/arch /export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/lib /export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/arch /export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/lib /export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/arch /export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/lib /export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/arch /export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/lib /export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/arch /export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/lib /export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/arch /export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/lib /export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/arch /export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/lib /export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/arch /export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/lib /export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/arch /export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/lib /export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/arch /export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/lib /export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/arch /export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/lib /export/home/njh/.cpan/build/Graph-0.9704-2/blib/arch /export/home/njh/.cpan/build/Graph-0.9704-2/blib/lib /export/home/njh/.cpan/build/Error-0.17028-1/blib/arch /export/home/njh/.cpan/build/Error-0.17028-1/blib/lib /export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/arch /export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/lib /export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/arch /export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/lib /export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/arch /export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/lib /export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/arch /export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/lib /export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/arch /export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/lib /export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/arch /export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/lib /export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/arch /export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/lib /export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/arch /export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/lib /export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/arch /export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/lib /export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/arch /export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/lib /export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/arch /export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/lib /export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/arch /export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/lib /export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/arch /export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/lib /export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/arch /export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/lib /export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/arch /export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/lib /export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/arch /export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/lib /export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/arch /export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/lib /export/home/njh/.cpan/build/Graph-0.9704-2/blib/arch /export/home/njh/.cpan/build/Graph-0.9704-2/blib/lib /export/home/njh/.cpan/build/Error-0.17028-1/blib/arch /export/home/njh/.cpan/build/Error-0.17028-1/blib/lib /export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/arch /export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/lib /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5/i86pc-solaris /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5 /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/i86pc-solaris /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5 .) at bin/bp_chaos_plot line 8.BEGIN failed--compilation aborted at bin/bp_chaos_plot line 8. at t/00-compile.t line 598, <GEN1900> line 2.
# Looks like you failed 1 test of 513.
t/00-compile.t ......................
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/513 subtests
t/Align/AlignStats.t ................ ok
t/Align/AlignUtil.t ................. ok
t/Align/SimpleAlign.t ............... ok
t/Align/TreeBuild.t ................. ok
t/Align/Utilities.t ................. ok
t/AlignIO/AlignIO.t ................. ok
t/AlignIO/arp.t ..................... ok
t/AlignIO/bl2seq.t .................. ok
t/AlignIO/clustalw.t ................ ok
t/AlignIO/emboss.t .................. ok
t/AlignIO/fasta.t ................... ok
t/AlignIO/largemultifasta.t ......... ok
t/AlignIO/maf.t ..................... ok
t/AlignIO/mase.t .................... ok
t/AlignIO/mega.t .................... ok
t/AlignIO/meme.t .................... ok
t/AlignIO/metafasta.t ............... ok
t/AlignIO/msf.t ..................... ok
t/AlignIO/nexus.t ................... ok
t/AlignIO/pfam.t .................... ok
t/AlignIO/phylip.t .................. ok
t/AlignIO/po.t ...................... ok
t/AlignIO/prodom.t .................. ok
t/AlignIO/psi.t ..................... ok
t/AlignIO/selex.t ................... ok
t/AlignIO/xmfa.t .................... ok
t/Annotation/Annotation.t ........... ok
t/Annotation/AnnotationAdaptor.t .... ok
t/author-mojibake.t ................. skipped: these tests are for testing by the author
t/author-pod-syntax.t ............... skipped: these tests are for testing by the author
t/LocalDB/Fasta.t ................... ok
t/LocalDB/Flat.t .................... ok
t/LocalDB/Index/Blast.t ............. ok
t/LocalDB/Index/BlastTable.t ........ ok
t/LocalDB/Index/Index.t ............. ok
t/LocalDB/Qual.t .................... ok
--------------------- WARNING ---------------------
MSG: Couldn't load Bio::DB::BioFetch
---------------------------------------------------
--------------------- WARNING ---------------------
MSG: Couldn't load Bio::DB::BioFetch
---------------------------------------------------
t/LocalDB/Registry.t ................ ok
t/LocalDB/Taxonomy/greengenes.t ..... ok
t/LocalDB/Taxonomy/silva.t .......... ok
t/Matrix/InstanceSite.t ............. ok
t/Matrix/IO/masta.t ................. ok
t/Matrix/IO/psm.t ................... ok
t/Matrix/Matrix.t ................... ok
t/Matrix/ProtMatrix.t ............... ok
t/Matrix/ProtPsm.t .................. ok
t/Matrix/SiteMatrix.t ............... ok
t/Ontology/GOterm.t ................. ok
t/Ontology/GraphAdaptor.t ........... ok
t/Ontology/IO/go.t .................. ok
t/Ontology/IO/interpro.t ............ ok
t/Ontology/IO/obo.t ................. ok
t/Ontology/Ontology.t ............... ok
t/Ontology/OntologyEngine.t ......... ok
t/Ontology/OntologyStore.t .......... ok
t/Ontology/Relationship.t ........... ok
t/Ontology/RelationshipType.t ....... ok
t/Ontology/Term.t ................... ok
t/RemoteDB/SeqRead_fail.t ........... ok
t/RemoteDB/Taxonomy.t ............... ok
t/Root/Exception.t .................. ok
t/Root/HTTPget.t .................... ok
t/Root/IO.t ......................... ok
t/Root/RootI.t ...................... ok
t/Root/RootIO.t ..................... ok
t/Root/Storable.t ................... ok
t/Root/Utilities.t .................. ok
t/SearchIO/axt.t .................... ok
t/SearchIO/blast.t .................. ok
t/SearchIO/blast_pull.t ............. ok
t/SearchIO/blasttable.t ............. ok
t/SearchIO/CigarString.t ............ ok
t/SearchIO/cross_match.t ............ ok
t/SearchIO/erpin.t .................. ok
t/SearchIO/exonerate.t .............. ok
t/SearchIO/fasta.t .................. ok
t/SearchIO/gmap_f9.t ................ ok
t/SearchIO/infernal.t ............... ok
t/SearchIO/megablast.t .............. ok
t/SearchIO/psl.t .................... ok
t/SearchIO/rnamotif.t ............... ok
t/SearchIO/SearchIO.t ............... ok
t/SearchIO/sim4.t ................... ok
t/SearchIO/SimilarityPair.t ......... ok
Can't locate object method "new" via package "Bio::Search::HSP::GenericHSP::SUPER" at /export/home/njh/.cpan/build/BioPerl-1.7.6-2/blib/lib/Bio/Search/HSP/GenericHSP.pm line 182, <GEN1> line 2564.
# Looks like your test exited with 255 just after 7.
t/SearchIO/Tiling.t .................
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 1134/1141 subtests
t/SearchIO/waba.t ................... ok
t/SearchIO/wise.t ................... ok
t/SearchIO/Writer/GbrowseGFF.t ...... ok
t/SearchIO/Writer/HitTableWriter.t .. ok
t/SearchIO/Writer/HSPTableWriter.t .. ok
t/SearchIO/Writer/HTMLWriter.t ...... ok
t/SearchIO/Writer/TextWriter.t ...... ok
t/Seq/DBLink.t ...................... ok
t/Seq/EncodedSeq.t .................. ok
t/Seq/LargeLocatableSeq.t ........... ok
t/Seq/LargePSeq.t ................... ok
t/Seq/LocatableSeq.t ................ ok
t/Seq/MetaSeq.t ..................... ok
t/Seq/PrimaryQual.t ................. ok
t/Seq/PrimarySeq.t .................. ok
t/Seq/PrimedSeq.t ................... ok
t/Seq/Quality.t ..................... ok
t/Seq/Seq.t ......................... ok
t/Seq/SimulatedRead.t ............... ok
t/SeqFeature/Amplicon.t ............. ok
t/SeqFeature/Clone.t ................ ok
t/SeqFeature/Collection.t ........... ok
t/SeqFeature/Computation.t .......... ok
t/SeqFeature/FeaturePair.t .......... ok
t/SeqFeature/Gene.t ................. ok
t/SeqFeature/Generic.t .............. ok
t/SeqFeature/Location.t ............. ok
t/SeqFeature/LocationFactory.t ...... ok
t/SeqFeature/Primer.t ............... ok
t/SeqFeature/Range.t ................ ok
t/SeqFeature/RangeI.t ............... ok
t/SeqFeature/SeqAnalysisParser.t .... ok
t/SeqFeature/SubSeq.t ............... ok
t/SeqFeature/Unflattener.t .......... ok
t/SeqIO/ace.t ....................... ok
t/SeqIO/asciitree.t ................. ok
t/SeqIO/bsml.t ...................... ok
t/SeqIO/bsml_sax.t .................. ok
t/SeqIO/embl.t ...................... ok
t/SeqIO/fasta.t ..................... ok
t/SeqIO/fastq.t ..................... ok
t/SeqIO/game.t ...................... ok
t/SeqIO/gbxml.t ..................... ok
t/SeqIO/gcg.t ....................... ok
t/SeqIO/genbank.t ................... ok
t/SeqIO/Handler.t ................... ok
t/SeqIO/interpro.t .................. ok
t/SeqIO/kegg.t ...................... ok
t/SeqIO/largefasta.t ................ ok
t/SeqIO/locuslink.t ................. ok
t/SeqIO/mbsout.t .................... ok
t/SeqIO/metafasta.t ................. ok
t/SeqIO/msout.t ..................... ok
t/SeqIO/MultiFile.t ................. ok
t/SeqIO/Multiple_fasta.t ............ ok
t/SeqIO/phd.t ....................... ok
t/SeqIO/pir.t ....................... ok
t/SeqIO/qual.t ...................... ok
t/SeqIO/raw.t ....................... ok
t/SeqIO/scf.t ....................... ok
t/SeqIO/SeqBuilder.t ................ ok
t/SeqIO/SeqIO.t ..................... ok
t/SeqIO/seqxml.t .................... ok
t/SeqIO/Splicedseq.t ................ ok
t/SeqIO/swiss.t ..................... ok
t/SeqIO/tab.t ....................... ok
t/SeqIO/table.t ..................... ok
t/SeqIO/tigr.t ...................... ok
t/SeqIO/tigrxml.t ................... ok
t/SeqIO/tinyseq.t ................... ok
t/SeqTools/Backtranslate.t .......... ok
t/SeqTools/CodonTable.t ............. ok
t/SeqTools/ECnumber.t ............... ok
t/SeqTools/GuessSeqFormat.t ......... ok
t/SeqTools/OddCodes.t ............... ok
t/SeqTools/SeqPattern.t ............. ok
t/SeqTools/SeqStats.t ............... ok
t/SeqTools/SeqUtils.t ............... ok
t/SeqTools/SeqWords.t ............... ok
t/Species.t ......................... ok
t/Tools/Alignment/Consed.t .......... ok
t/Tools/AmpliconSearch.t ............ ok
t/Tools/EMBOSS/Palindrome.t ......... ok
t/Tools/ePCR.t ...................... ok
t/Tools/Est2Genome.t ................ ok
t/Tools/FootPrinter.t ............... ok
t/Tools/Geneid.t .................... ok
t/Tools/Genewise.t .................. ok
t/Tools/Genomewise.t ................ ok
t/Tools/Genpred.t ................... ok
t/Tools/GFF.t ....................... ok
t/Tools/IUPAC.t ..................... ok
t/Tools/Lucy.t ...................... ok
t/Tools/Match.t ..................... ok
t/Tools/Phylo/Gerp.t ................ ok
t/Tools/Phylo/Molphy.t .............. ok
t/Tools/Phylo/Phylip/ProtDist.t ..... ok
t/Tools/pICalculator.t .............. ok
t/Tools/Primer3.t ................... ok
t/Tools/Promoterwise.t .............. ok
t/Tools/PrositeScan.t ............... ok
t/Tools/Pseudowise.t ................ ok
t/Tools/QRNA.t ...................... ok
t/Tools/RandDistFunctions.t ......... ok
t/Tools/RepeatMasker.t .............. ok
t/Tools/Seg.t ....................... ok
t/Tools/Sigcleave.t ................. ok
t/Tools/Signalp.t ................... ok
t/Tools/Signalp/ExtendedSignalp.t ... ok
t/Tools/Sim4.t ...................... ok
t/Tools/Spidey/Spidey.t ............. ok
t/Tools/TandemRepeatsFinder.t ....... ok
t/Tools/TargetP.t ................... ok
t/Tools/Tmhmm.t ..................... ok
t/Tools/tRNAscanSE.t ................ ok
t/Tree/Compatible.t ................. ok
t/Tree/Node.t ....................... ok
t/Tree/RandomTreeFactory.t .......... ok
t/Tree/Tree.t ....................... ok
t/Tree/TreeIO.t ..................... ok
t/Tree/TreeIO/lintree.t ............. ok
t/Tree/TreeIO/newick.t .............. ok
t/Tree/TreeIO/nexus.t ............... ok
t/Tree/TreeIO/nhx.t ................. ok
t/Tree/TreeIO/phyloxml.t ............ ok
t/Tree/TreeIO/tabtree.t ............. ok
t/Tree/TreeStatistics.t ............. ok
Test Summary Report
-------------------
t/00-compile.t (Wstat: 256 Tests: 513 Failed: 1)
Failed test: 476
Non-zero exit status: 1
t/SearchIO/Tiling.t (Wstat: 65280 Tests: 7 Failed: 0)
Non-zero exit status: 255
Parse errors: Bad plan. You planned 1141 tests but ran 7.
Files=212, Tests=13724, 174 wallclock secs ( 2.43 usr 0.63 sys + 112.61 cusr 43.67 csys = 159.34 CPU)
Result: FAIL
Failed 2/212 test programs. 1/13724 subtests failed.
*** Error code 255
make: Fatal error: Command failed for target `test_dynamic'
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
---------------------- ----- ----------
AnyDBM_File 0 1.00
base 0 2.15
Carp 0 1.50
constant 0 1.20
Cwd 0 3.75
Data::Dumper 0 2.173
Data::Stag 0 0.14
DB_File 0 1.820
Digest::MD5 0 2.39
Dumpvalue 0 1.13
Error 0 0.17028
Exporter 0 5.73
Fcntl 0 1.06
File::Basename 0 2.78
File::Copy 0 2.18
File::Path 0 2.08_01
File::Spec 0 3.75
File::Spec::Functions 0 3.75
File::Temp 0 0.22
FileHandle 0 2.02
Getopt::Long 0 2.51
Graph::Directed 0 0
HTTP::Request::Common 0 6.18
HTTP::Response 0 6.18
integer 0 1.00
IO::File 0 1.14
IO::Handle 0 1.28
IO::Pipe 0 1.13
IO::Scalar 0 2.111
IO::Socket 0 1.31
IO::String 0 1.08
IPC::Run 0 20180523.0
List::MoreUtils 0 0.428
List::Util 0 1.52
LWP::UserAgent 0 6.42
Math::BigFloat 0 1.60
Module::Build 0 0.4224
overload 0 1.10
parent 0 0.237
perl 5.006 5.012005
Pod::Usage 0 1.36
POSIX 0 1.19
Scalar::Util 0 1.52
Set::Scalar 0 1.29
Storable 0 2.22
strict 0 1.04
Symbol 0 1.07
Test::Builder 0 1.302140
Test::Builder::Module 0 1.302140
Test::Most 0 0.35
Test::RequiresInternet 0 0.05
Text::Balanced 0 2.02
Text::Wrap 0 2009.0305
Tie::Handle 0 4.2
Tie::RefHash 0 1.38
Time::HiRes 0 1.9719
UNIVERSAL 0 1.06
URI 0 1.74
utf8 0 1.08
vars 0 1.01
version 0 0.9924
warnings 0 1.09
XML::DOM 0 1.46
XML::DOM::XPath 0 0.14
XML::LibXML 0 2.0201
XML::LibXML::Reader 0 2.0201
XML::Parser::PerlSAX 0 0.08
XML::SAX 0 1.02
XML::SAX::Base 0 1.09
XML::SAX::Writer 0 0.57
XML::Twig 0 3.52
XML::Writer 0 0.625
YAML 0 1.29
build_requires:
Module Need Have
---------------------- ----- ----------
ExtUtils::MakeMaker 0 7.34
File::Spec 0 3.75
FindBin 0 1.50
IO::Handle 0 1.28
IPC::Open3 0 1.05
lib 0 0.62
Test::Memory::Cycle 0 1.06
Test::More 0 1.302140
Test::Weaken 0 3.022000
configure_requires:
Module Need Have
---------------------- ----- ----------
ExtUtils::MakeMaker 0 7.34
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
NONINTERACTIVE_TESTING = 1
PATH = /export/home/njh/perl5/perlbrew/bin:/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin:/export/home/njh/src/njh/smoker/bin:/usr/bin
PERL5LIB = /export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/arch:/export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/lib:/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/arch:/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/lib:/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/arch:/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/lib:/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/arch:/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/lib:/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/arch:/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/lib:/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/arch:/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/lib:/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/arch:/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/lib:/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/arch:/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/lib:/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/arch:/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/lib:/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/arch:/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/lib:/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/arch:/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/lib:/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/arch:/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/lib:/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/arch:/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/lib:/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/arch:/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/lib:/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/arch:/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/lib:/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/arch:/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/lib:/export/home/njh/.cpan/build/Graph-0.9704-2/blib/arch:/export/home/njh/.cpan/build/Graph-0.9704-2/blib/lib:/export/home/njh/.cpan/build/Error-0.17028-1/blib/arch:/export/home/njh/.cpan/build/Error-0.17028-1/blib/lib:/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/arch:/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 17690
PERL5_CPAN_IS_RUNNING = 17690
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 17671,17690
PERLBREW_HOME = /export/home/njh/.perlbrew
PERLBREW_MANPATH = /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/man
PERLBREW_PATH = /export/home/njh/perl5/perlbrew/bin:/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin
PERLBREW_PERL = perl-5.12.5
PERLBREW_ROOT = /export/home/njh/perl5/perlbrew
PERLBREW_SHELLRC_VERSION = 0.87
PERLBREW_VERSION = 0.87
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/bin/bash
TERM = dumb
TMPDIR = /tmp/testwrapper.17676
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin/perl
$UID/$EUID = 101 / 101
$GID = 10 10
$EGID = 10 10
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.26
CPAN::Meta 2.143240
Cwd 3.75
ExtUtils::CBuilder 0.280230
ExtUtils::Command 7.34
ExtUtils::Install 2.06
ExtUtils::MakeMaker 7.34
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.35
File::Spec 3.75
JSON 4.02
JSON::PP 2.97001
Module::Build 0.4224
Module::Signature n/a
Parse::CPAN::Meta 1.4414
Test::Harness 3.42
Test::More 1.302140
YAML 1.29
YAML::Syck 1.31
version 0.9924
--
Summary of my perl5 (revision 5 version 12 subversion 5) configuration:
Platform:
osname=solaris, osvers=2.11, archname=i86pc-solaris
uname='sunos vultr1.bandsman.co.uk 5.11 illumos-b075503f22 i86pc i386 i86pc '
config_args='-de -Dprefix=/export/home/njh/perl5/perlbrew/perls/perl-5.12.5 -Aeval:scriptdir=/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=undef, use64bitall=undef, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='/opt/SUNWspro/bin/cc', ccflags ='-I/usr/gnu/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DPERL_USE_SAFE_PUTENV',
optimize='-O',
cppflags='-I/usr/gnu/include'
ccversion='Sun C 5.10 SunOS_i386 2009/06/03', gccversion='', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=4, prototype=define
Linker and Libraries:
ld='/opt/SUNWspro/bin/cc', ldflags =' -L/usr/lib -L/usr/ccs/lib -L/opt/sunstudio12.1/prod/lib -L/lib -L/usr/gnu/lib '
libpth=/usr/lib /usr/ccs/lib /opt/sunstudio12.1/prod/lib /lib /usr/gnu/lib
libs=-lsocket -lnsl -lgdbm -ldb -ldl -lm -lc
perllibs=-lsocket -lnsl -ldl -lm -lc
libc=/lib/libc.so, so=so, useshrplib=true, libperl=libperl.so
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' -R /export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/i86pc-solaris/CORE'
cccdlflags='-KPIC', lddlflags='-G -L/usr/lib -L/usr/ccs/lib -L/opt/sunstudio12.1/prod/lib -L/lib -L/usr/gnu/lib'
Characteristics of this binary (from libperl):
Compile-time options: PERL_DONT_CREATE_GVSV PERL_MALLOC_WRAP
PERL_USE_SAFE_PUTENV USE_LARGE_FILES USE_PERLIO
USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.52
Built under solaris
Compiled at Sep 16 2018 03:31:51
%ENV:
PERL5LIB="/export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/arch:/export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/lib:/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/arch:/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/lib:/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/arch:/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/lib:/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/arch:/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/lib:/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/arch:/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/lib:/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/arch:/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/lib:/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/arch:/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/lib:/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/arch:/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/lib:/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/arch:/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/lib:/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/arch:/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/lib:/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/arch:/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/lib:/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/arch:/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/lib:/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/arch:/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/lib:/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/arch:/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/lib:/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/arch:/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/lib:/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/arch:/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/lib:/export/home/njh/.cpan/build/Graph-0.9704-2/blib/arch:/export/home/njh/.cpan/build/Graph-0.9704-2/blib/lib:/export/home/njh/.cpan/build/Error-0.17028-1/blib/arch:/export/home/njh/.cpan/build/Error-0.17028-1/blib/lib:/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/arch:/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="17690"
PERL5_CPAN_IS_RUNNING="17690"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="17671,17690"
PERLBREW_HOME="/export/home/njh/.perlbrew"
PERLBREW_MANPATH="/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/man"
PERLBREW_PATH="/export/home/njh/perl5/perlbrew/bin:/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/bin"
PERLBREW_PERL="perl-5.12.5"
PERLBREW_ROOT="/export/home/njh/perl5/perlbrew"
PERLBREW_SHELLRC_VERSION="0.87"
PERLBREW_VERSION="0.87"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/arch
/export/home/njh/.cpan/build/XML-Writer-0.625-2/blib/lib
/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/arch
/export/home/njh/.cpan/build/XML-Twig-3.52-1/blib/lib
/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/arch
/export/home/njh/.cpan/build/XML-SAX-Writer-0.57-2/blib/lib
/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/arch
/export/home/njh/.cpan/build/XML-Filter-BufferText-1.01-2/blib/lib
/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/arch
/export/home/njh/.cpan/build/XML-LibXML-2.0201-2/blib/lib
/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/arch
/export/home/njh/.cpan/build/Alien-Libxml2-0.11-2/blib/lib
/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/arch
/export/home/njh/.cpan/build/Alien-Build-1.92-2/blib/lib
/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/arch
/export/home/njh/.cpan/build/FFI-CheckLib-0.25-2/blib/lib
/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/arch
/export/home/njh/.cpan/build/ExtUtils-ParseXS-3.35-2/blib/lib
/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/arch
/export/home/njh/.cpan/build/XML-DOM-XPath-0.14-2/blib/lib
/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/arch
/export/home/njh/.cpan/build/XML-XPathEngine-0.14-2/blib/lib
/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/arch
/export/home/njh/.cpan/build/XML-DOM-1.46-2/blib/lib
/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/arch
/export/home/njh/.cpan/build/XML-RegExp-0.04-2/blib/lib
/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/arch
/export/home/njh/.cpan/build/libxml-perl-0.08-2/blib/lib
/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/arch
/export/home/njh/.cpan/build/Test-Weaken-3.022000-2/blib/lib
/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/arch
/export/home/njh/.cpan/build/Set-Scalar-1.29-1/blib/lib
/export/home/njh/.cpan/build/Graph-0.9704-2/blib/arch
/export/home/njh/.cpan/build/Graph-0.9704-2/blib/lib
/export/home/njh/.cpan/build/Error-0.17028-1/blib/arch
/export/home/njh/.cpan/build/Error-0.17028-1/blib/lib
/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/arch
/export/home/njh/.cpan/build/Data-Stag-0.14-2/blib/lib
/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5/i86pc-solaris
/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5
/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/i86pc-solaris
/export/home/njh/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5
.