Report for Bio-Biblio-1.70

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From: metabase:user:314402c4-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Bio-Biblio-1.70 v5.25.12 GNU/Linux
Date: 2017-04-25T19:09:47Z

This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear carandraug,

This is a computer-generated report for Bio-Biblio-1.70
on perl 5.25.12, created by CPAN-Reporter-1.2018.

Thank you for uploading your work to CPAN.  However, there was a problem
testing your distribution.

If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:

http://wiki.cpantesters.org/wiki/CPANAuthorNotes

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

none provided

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 "/opt/perl-5.25.12/bin/perl5.25.12" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok

syntax error at line 1, column 0, byte 0 at /opt/perl-5.25.12/lib/site_perl/5.25.12/x86_64-linux/XML/Parser.pm line 187.
# Looks like your test exited with 255 just after 2.
t/biofetch.t .............. 
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 8/10 subtests 
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing

Test Summary Report
-------------------
t/biofetch.t            (Wstat: 65280 Tests: 2 Failed: 0)
  Non-zero exit status: 255
  Parse errors: Bad plan.  You planned 10 tests but ran 2.
Files=10, Tests=601, 12 wallclock secs ( 0.13 usr  0.01 sys +  5.07 cusr  0.60 csys =  5.81 CPU)
Result: FAIL
Failed 1/10 test programs. 0/601 subtests failed.
make: *** [test_dynamic] Error 255

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                  Need Have    
    ----------------------- ---- --------
    Bio::Annotation::DBLink 0    0       
    Bio::DB::DBFetch        0    0       
    Bio::Root::IO           0    0       
    Bio::Root::Root         0    1.007001
    Bio::Root::RootI        0    0       
    Data::Dumper            0    2.161   
    Getopt::Std             0    1.12    
    LWP::Simple             0    6.26    
    parent                  0    0.236   
    SOAP::Lite              0    1.20    
    strict                  0    1.11    
    Symbol                  0    1.08    
    URI::Escape             0    3.31    
    utf8                    0    1.19    
    vars                    0    1.03    
    warnings                0    1.37    
    XML::Parser             0    2.44    
    XML::Twig               0    3.52    

build_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    File::Find              0    1.34    
    File::Spec              0    3.62    
    File::Temp              0    0.2304  
    Test::More              0    1.302083

configure_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    ExtUtils::MakeMaker     6.30 7.24    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    LANG = en_US.UTF-8
    PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/linux-gnu:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
    PERL5LIB = 
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 15137
    PERL5_CPAN_IS_RUNNING = 15137
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 10394,15137
    PERLDOC = -MPod::Perldoc::ToTextOverstrike
    PERL_BATCH = yes
    PERL_CANARY_STABILITY_NOPROMPT = 1
    PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1002/2017042403/cpanreporter_001_config.ini
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_USE_UNSAFE_INC = 1
    SHELL = /bin/zsh
    TERM = screen
    TMPDIR = /var/tmp/cpansmoker-1002/2017042403

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /opt/perl-5.25.12/bin/perl5.25.12
    $UID/$EUID = 1002 / 1002
    $GID = 1002 1002
    $EGID = 1002 1002

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.18    
    CPAN::Meta          2.150010
    Cwd                 3.62    
    ExtUtils::CBuilder  0.280224
    ExtUtils::Command   7.24    
    ExtUtils::Install   2.04    
    ExtUtils::MakeMaker 7.24    
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.30    
    File::Spec          3.62    
    JSON                2.90    
    JSON::PP            2.27400 
    Module::Build       0.4222  
    Module::Signature   0.81    
    Parse::CPAN::Meta   2.150010
    Test::Harness       3.39    
    Test::More          1.302083
    YAML                1.23    
    YAML::Syck          1.30    
    version             0.9918  


--

Summary of my perl5 (revision 5 version 25 subversion 12) configuration:
   
  Platform:
    osname=linux
    osvers=3.10.0-514.16.1.el7.x86_64
    archname=x86_64-linux
    uname='linux prod5 3.10.0-514.16.1.el7.x86_64 #1 smp wed apr 12 15:04:24 utc 2017 x86_64 x86_64 x86_64 gnulinux '
    config_args='-ds -e -Dprefix=/opt/perl-5.25.12 -Dusedevel -Dusemallocwrap=no -Dcf_email=srezic@cpan.org'
    hint=recommended
    useposix=true
    d_sigaction=define
    useithreads=undef
    usemultiplicity=undef
    use64bitint=define
    use64bitall=define
    uselongdouble=undef
    usemymalloc=n
    default_inc_excludes_dot=define
    bincompat5005=undef
  Compiler:
    cc='cc'
    ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2'
    optimize='-O2'
    cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
    ccversion=''
    gccversion='4.8.5 20150623 (Red Hat 4.8.5-11)'
    gccosandvers=''
    intsize=4
    longsize=8
    ptrsize=8
    doublesize=8
    byteorder=12345678
    doublekind=3
    d_longlong=define
    longlongsize=8
    d_longdbl=define
    longdblsize=16
    longdblkind=3
    ivtype='long'
    ivsize=8
    nvtype='double'
    nvsize=8
    Off_t='off_t'
    lseeksize=8
    alignbytes=8
    prototype=define
  Linker and Libraries:
    ld='cc'
    ldflags =' -fstack-protector-strong -L/usr/local/lib'
    libpth=/usr/local/lib /usr/lib /lib/../lib64 /usr/lib/../lib64 /lib /lib64 /usr/lib64 /usr/local/lib64
    libs=-lpthread -lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
    perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
    libc=libc-2.17.so
    so=so
    useshrplib=false
    libperl=libperl.a
    gnulibc_version='2.17'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs
    dlext=so
    d_dlsymun=undef
    ccdlflags='-Wl,-E'
    cccdlflags='-fPIC'
    lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'


Characteristics of this binary (from libperl): 
  Compile-time options:
    HAS_TIMES
    PERLIO_LAYERS
    PERL_COPY_ON_WRITE
    PERL_DONT_CREATE_GVSV
    PERL_OP_PARENT
    PERL_PRESERVE_IVUV
    PERL_USE_DEVEL
    USE_64_BIT_ALL
    USE_64_BIT_INT
    USE_LARGE_FILES
    USE_LOCALE
    USE_LOCALE_COLLATE
    USE_LOCALE_CTYPE
    USE_LOCALE_NUMERIC
    USE_LOCALE_TIME
    USE_PERLIO
    USE_PERL_ATOF
  Built under linux
  Compiled at Apr 20 2017 22:37:08
  %ENV:
    PERL5LIB=""
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="15137"
    PERL5_CPAN_IS_RUNNING="15137"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="10394,15137"
    PERLDOC="-MPod::Perldoc::ToTextOverstrike"
    PERL_BATCH="yes"
    PERL_CANARY_STABILITY_NOPROMPT="1"
    PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1002/2017042403/cpanreporter_001_config.ini"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    /opt/perl-5.25.12/lib/site_perl/5.25.12/x86_64-linux
    /opt/perl-5.25.12/lib/site_perl/5.25.12
    /opt/perl-5.25.12/lib/5.25.12/x86_64-linux
    /opt/perl-5.25.12/lib/5.25.12
    .