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From: metabase:user:3c0d75b6-029c-11e5-90b1-5b610b895903
Subject: PASS AlignDB-Codon-1.1.1 v5.24.0 GNU/Linux
Date: 2016-12-19T10:06:20Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Qiang Wang,
This is a computer-generated report for AlignDB-Codon-1.1.1
on perl 5.24.0, created by CPAN-Reporter-1.2017.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
# Testing AlignDB::Codon 1.1.1
t/00.load.t ........ ok
t/01.codontable.t .. ok
t/03.bioperl.t ..... ok
t/02.syn.t ......... ok
t/05.seq.t ......... ok
t/04.syn_nsy.t ..... ok
t/06.start_ter.t ... ok
t/07.convert.t ..... ok
All tests successful.
Files=8, Tests=659, 19 wallclock secs ( 1.22 usr 0.33 sys + 23.45 cusr 6.87 csys = 31.87 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------------- -------- --------
AlignDB::IntSpan 0 1.1.1
List::MoreUtils 0 0.415
Moose 0 2.1806
perl 5.010001 5.024000
YAML::Syck 0 1.29
build_requires:
Module Need Have
------------------------- -------- --------
Test::More 0.88 1.302071
configure_requires:
Module Need Have
------------------------- -------- --------
Module::Build::Tiny 0.035 0.039
opt_build_requires:
Module Need Have
------------------------- -------- --------
Bio::Align::DNAStatistics 0 1.007001
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
HARNESS_OPTIONS = j2
LANG = C.UTF-8
PATH = /home/fperrad/perl5/perlbrew/bin:/home/fperrad/perl5/perlbrew/perls/perl-5.24.0/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games
PERL5LIB = 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PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 18812
PERL5_CPAN_IS_RUNNING = 18812
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 400,18812
PERLBREW_BASHRC_VERSION = 0.76
PERLBREW_HOME = /home/fperrad/.perlbrew
PERLBREW_MANPATH = /home/fperrad/perl5/perlbrew/perls/perl-5.24.0/man
PERLBREW_PATH = /home/fperrad/perl5/perlbrew/bin:/home/fperrad/perl5/perlbrew/perls/perl-5.24.0/bin
PERLBREW_PERL = perl-5.24.0
PERLBREW_ROOT = /home/fperrad/perl5/perlbrew
PERLBREW_VERSION = 0.76
PERL_CR_SMOKER_CURRENT = AlignDB-Codon-1.1.1
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = xterm-256color
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/fperrad/perl5/perlbrew/perls/perl-5.24.0/bin/perl
$UID/$EUID = 1001 / 1001
$GID = 1001 27 1001
$EGID = 1001 27 1001
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.11
CPAN::Meta 2.150005
Cwd 3.63
ExtUtils::CBuilder 0.280225
ExtUtils::Command 7.10
ExtUtils::Install 2.04
ExtUtils::MakeMaker 7.10_01
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.31
File::Spec 3.63
JSON 2.90
JSON::PP 2.27300
Module::Build 0.4218
Module::Signature n/a
Parse::CPAN::Meta 1.4417
Test::Harness 3.36
Test::More 1.302071
YAML 1.20
YAML::Syck 1.29
version 0.9916
--
Summary of my perl5 (revision 5 version 24 subversion 0) configuration:
Platform:
osname=linux, osvers=3.4.107-lime, archname=armv7l-linux
uname='linux lime 3.4.107-lime #15 smp preempt fri may 22 11:36:49 cest 2015 armv7l gnulinux '
config_args='-de -Dprefix=/home/fperrad/perl5/perlbrew/perls/perl-5.24.0 -Aeval:scriptdir=/home/fperrad/perl5/perlbrew/perls/perl-5.24.0/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
use64bitint=undef, use64bitall=undef, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2',
optimize='-O2',
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion='', gccversion='4.9.2', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234, doublekind=3
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=8, longdblkind=0
ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/arm-linux-gnueabihf/4.9/include-fixed /usr/include/arm-linux-gnueabihf /usr/lib /lib/arm-linux-gnueabihf /lib /usr/lib/arm-linux-gnueabihf
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.19.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.19'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV USE_LARGE_FILES USE_LOCALE
USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_LOCALE_TIME USE_PERLIO
USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.38
Built under linux
Compiled at May 9 2016 21:01:38
%ENV:
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PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="18812"
PERL5_CPAN_IS_RUNNING="18812"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="400,18812"
PERLBREW_BASHRC_VERSION="0.76"
PERLBREW_HOME="/home/fperrad/.perlbrew"
PERLBREW_MANPATH="/home/fperrad/perl5/perlbrew/perls/perl-5.24.0/man"
PERLBREW_PATH="/home/fperrad/perl5/perlbrew/bin:/home/fperrad/perl5/perlbrew/perls/perl-5.24.0/bin"
PERLBREW_PERL="perl-5.24.0"
PERLBREW_ROOT="/home/fperrad/perl5/perlbrew"
PERLBREW_VERSION="0.76"
PERL_CR_SMOKER_CURRENT="AlignDB-Codon-1.1.1"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
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/home/fperrad/.cpan/build/Algorithm-Munkres-0.08-qSsgkN/blib/lib
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/home/fperrad/.cpan/build/OLE-Storage_Lite-0.19-gOKQNG/blib/arch
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