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From: metabase:user:8286d1fc-3d52-11e2-9ec4-cb9cdd236785
Subject: PASS CaCORE-3.2.1_r1 v5.8.8 GNU/Linux
Date: 2013-01-12T23:00:06Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear National Cancer Institute Center for Bioinformatics,
This is a computer-generated report for CaCORE-3.2.1_r1
on perl 5.8.8, created by CPAN-Reporter-1.2006.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 /opt/perl-5.8.8/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
[15:00:00] t/CaCORE.t .. ok 1592 ms
[15:00:00]
All tests successful.
Files=1, Tests=11, 2 wallclock secs ( 0.09 usr 0.03 sys + 0.91 cusr 0.20 csys = 1.23 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ---- ----
XML::DOM 1.25 1.44
build_requires:
Module Need Have
------------------- ---- ----
ExtUtils::MakeMaker 0 6.64
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTHOR_TESTING = 1
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
PATH = /usr/lib/qt-3.3/bin:/usr/kerberos/sbin:/usr/kerberos/bin:/usr/lib/ccache:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/X11R6/bin:/usr/lib/alliance/bin:/root/bin:/usr/lib/alliance/bin
PERL5LIB = /root/.cpan/build/CURRENT-0.01-PO9Mes/blib/arch:/root/.cpan/build/CURRENT-0.01-PO9Mes/blib/lib:/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/arch:/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/lib:/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/arch:/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/lib:/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/arch:/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/lib:/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/arch:/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/lib:/root/.cpan/build/Boulder-1.30-ciiULn/blib/arch:/root/.cpan/build/Boulder-1.30-ciiULn/blib/lib:/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/arch:/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/lib:/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/arch:/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/lib:/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/arch:/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/lib:/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/arch:/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/lib:/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/arch:/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/lib:/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/arch:/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/lib:/root/.cpan/build/AutoCode-0.2-i32UCp/blib/arch:/root/.cpan/build/AutoCode-0.2-i32UCp/blib/lib:/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/arch:/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/lib:/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/arch:/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/lib:/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/arch:/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/lib:/root/.cpan/build/Aspect-0.96-aSKINE/blib/arch:/root/.cpan/build/Aspect-0.96-aSKINE/blib/lib:/root/.cpan/build/Aspect-1.03-6igXV4/blib/arch:/root/.cpan/build/Aspect-1.03-6igXV4/blib/lib:/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/arch:/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/lib:/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/arch:/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/lib:/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/arch:/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/lib:/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/arch:/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/lib:/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/arch:/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/lib:/root/.cpan/build/libalarm-1.0-TE31Ni/blib/arch:/root/.cpan/build/libalarm-1.0-TE31Ni/blib/lib:/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/arch:/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/lib:/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/arch:/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/lib:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/arch:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/lib:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/arch:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/lib:/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/arch:/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/lib:/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/arch:/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/lib:/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/arch:/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 13945
PERL5_CPAN_IS_RUNNING = 13945
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 13943,13945
PERL_ANYEVENT_MODEL = POE
PERL_ANYEVENT_VERBOSE = 1
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = xterm
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /opt/perl-5.8.8/bin/perl
$UID/$EUID = 0 / 0
$GID = 0 10 6 4 3 2 1 0
$EGID = 0 10 6 4 3 2 1 0
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 1.99_51
CPAN::Meta 2.120921
Cwd 3.33
ExtUtils::CBuilder 0.280205
ExtUtils::Command 1.17
ExtUtils::Install 1.54
ExtUtils::MakeMaker 6.64
ExtUtils::Manifest 1.61
ExtUtils::ParseXS 3.18
File::Spec 3.33
JSON 2.53
JSON::PP 2.27200
Module::Build 0.4003
Module::Signature 0.70
Parse::CPAN::Meta 1.4404
Test::Harness 3.25
Test::More 0.98
YAML 0.84
YAML::Syck 1.22
version 0.9901
--
Summary of my perl5 (revision 5 version 8 subversion 8) configuration:
Platform:
osname=linux, osvers=2.6.18-1.2798.fc6, archname=i686-linux-thread-multi-64int-ld
uname='linux localhost.localdomain 2.6.18-1.2798.fc6 #1 smp mon oct 16 14:54:20 edt 2006 i686 i686 i386 gnulinux '
config_args='-Dcc=gcc -Dprefix=/opt/perl-5.8.8 -DDEBUGGING'
hint=recommended, useposix=true, d_sigaction=define
usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
use64bitint=define use64bitall=undef uselongdouble=define
usemymalloc=y, bincompat5005=undef
Compiler:
cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include'
ccversion='', gccversion='4.1.2 20070626 (Red Hat 4.1.2-13)', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
ivtype='long long', ivsize=8, nvtype='long double', nvsize=12, Off_t='off_t', lseeksize=8
alignbytes=4, prototype=define
Linker and Libraries:
ld='gcc', ldflags =' -L/usr/local/lib'
libpth=/usr/local/lib /lib /usr/lib
libs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
libc=/lib/libc-2.5.so, so=so, useshrplib=true, libperl=libperl.so
gnulibc_version='2.5'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E -Wl,-rpath,/opt/perl-5.8.8/lib/5.8.8/i686-linux-thread-multi-64int-ld/CORE'
cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'
Characteristics of this binary (from libperl):
Compile-time options: MULTIPLICITY MYMALLOC PERL_IMPLICIT_CONTEXT
PERL_MALLOC_WRAP THREADS_HAVE_PIDS USE_64_BIT_INT
USE_ITHREADS USE_LARGE_FILES USE_LONG_DOUBLE
USE_PERLIO USE_REENTRANT_API
Built under linux
Compiled at Dec 3 2012 07:44:24
%ENV:
PERL5LIB="/root/.cpan/build/CURRENT-0.01-PO9Mes/blib/arch:/root/.cpan/build/CURRENT-0.01-PO9Mes/blib/lib:/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/arch:/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/lib:/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/arch:/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/lib:/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/arch:/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/lib:/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/arch:/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/lib:/root/.cpan/build/Boulder-1.30-ciiULn/blib/arch:/root/.cpan/build/Boulder-1.30-ciiULn/blib/lib:/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/arch:/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/lib:/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/arch:/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/lib:/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/arch:/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/lib:/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/arch:/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/lib:/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/arch:/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/lib:/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/arch:/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/lib:/root/.cpan/build/AutoCode-0.2-i32UCp/blib/arch:/root/.cpan/build/AutoCode-0.2-i32UCp/blib/lib:/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/arch:/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/lib:/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/arch:/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/lib:/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/arch:/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/lib:/root/.cpan/build/Aspect-0.96-aSKINE/blib/arch:/root/.cpan/build/Aspect-0.96-aSKINE/blib/lib:/root/.cpan/build/Aspect-1.03-6igXV4/blib/arch:/root/.cpan/build/Aspect-1.03-6igXV4/blib/lib:/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/arch:/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/lib:/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/arch:/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/lib:/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/arch:/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/lib:/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/arch:/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/lib:/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/arch:/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/lib:/root/.cpan/build/libalarm-1.0-TE31Ni/blib/arch:/root/.cpan/build/libalarm-1.0-TE31Ni/blib/lib:/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/arch:/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/lib:/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/arch:/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/lib:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/arch:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/lib:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/arch:/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/lib:/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/arch:/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/lib:/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/arch:/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/lib:/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/arch:/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="13945"
PERL5_CPAN_IS_RUNNING="13945"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="13943,13945"
PERL_ANYEVENT_MODEL="POE"
PERL_ANYEVENT_VERBOSE="1"
PERL_MM_USE_DEFAULT="1"
@INC:
/root/.cpan/build/CURRENT-0.01-PO9Mes/blib/arch
/root/.cpan/build/CURRENT-0.01-PO9Mes/blib/lib
/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/arch
/root/.cpan/build/CGI-SecureState-0.36-J7TXvE/blib/lib
/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/arch
/root/.cpan/build/Business-PayPal-API-0.70-ZDQmOu/blib/lib
/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/arch
/root/.cpan/build/Business-3DSecure-Cardinal-0.06-9Qv1Z5/blib/lib
/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/arch
/root/.cpan/build/Business-3DSecure-0.02-pkYiPl/blib/lib
/root/.cpan/build/Boulder-1.30-ciiULn/blib/arch
/root/.cpan/build/Boulder-1.30-ciiULn/blib/lib
/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/arch
/root/.cpan/build/Bio-MAGE-Utils-20030502.0-atqFzM/blib/lib
/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/arch
/root/.cpan/build/Bio-MAGE-20020902.6-l_HQwr/blib/lib
/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/arch
/root/.cpan/build/Biblio-Document-Parser-1.10-JfautW/blib/lib
/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/arch
/root/.cpan/build/BerkeleyDB-0.51-02tQLt/blib/lib
/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/arch
/root/.cpan/build/Barcode-Cuecat-1.20-Z4bOCt/blib/lib
/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/arch
/root/.cpan/build/AutoCurry-0.1003-8do9_Q/blib/lib
/root/.cpan/build/AutoCode-0.2-i32UCp/blib/arch
/root/.cpan/build/AutoCode-0.2-i32UCp/blib/lib
/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/arch
/root/.cpan/build/Audio-Metadata-0.15-ngGOM8/blib/lib
/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/arch
/root/.cpan/build/Audio-Cuefile-Parser-k0gxSv/blib/lib
/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/arch
/root/.cpan/build/Attribute-Curried-0.02-gpTHqu/blib/lib
/root/.cpan/build/Aspect-0.96-aSKINE/blib/arch
/root/.cpan/build/Aspect-0.96-aSKINE/blib/lib
/root/.cpan/build/Aspect-1.03-6igXV4/blib/arch
/root/.cpan/build/Aspect-1.03-6igXV4/blib/lib
/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/arch
/root/.cpan/build/App-ZofCMS-Plugin-CurrentPageURI-0.0101-ONL4IF/blib/lib
/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/arch
/root/.cpan/build/App-Adenosine-2.001005-PTd34T/blib/lib
/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/arch
/root/.cpan/build/CGI-Ex-2.38-jXgTJf/blib/lib
/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/arch
/root/.cpan/build/Apache-App-Mercury-0.80-j7h2mH/blib/lib
/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/arch
/root/.cpan/build/Alzabo-0.92-9Dsq0I/blib/lib
/root/.cpan/build/libalarm-1.0-TE31Ni/blib/arch
/root/.cpan/build/libalarm-1.0-TE31Ni/blib/lib
/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/arch
/root/.cpan/build/Action-Generic-0.000004-VqUUBi/blib/lib
/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/arch
/root/.cpan/build/Acme-Timecube-0.01-WrDFIC/blib/lib
/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/arch
/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-Backend-insultserver-1.0-Sn7Sxm/blib/lib
/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/arch
/root/.cpan/build/Acme-Scurvy-Whoreson-BilgeRat-1.1-2M7Ybs/blib/lib
/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/arch
/root/.cpan/build/Acme-Curse-0.0.1-CuHakA/blib/lib
/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/arch
/root/.cpan/build/Acme-Current-Forever-1.00-LDooTW/blib/lib
/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/arch
/root/.cpan/build/AMF-Perl-0.15-Urk5G4/blib/lib
/opt/perl-5.8.8/lib/5.8.8/i686-linux-thread-multi-64int-ld
/opt/perl-5.8.8/lib/5.8.8
/opt/perl-5.8.8/lib/site_perl/5.8.8/i686-linux-thread-multi-64int-ld
/opt/perl-5.8.8/lib/site_perl/5.8.8
/opt/perl-5.8.8/lib/site_perl
.