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From: metabase:user:e7b34f46-36ca-11e0-a826-945c7ca43f85
Subject: FAIL Data-Babel-Client-0.02 v5.18.0 FreeBSD
Date: 2013-08-24T04:58:42Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Victor Cassen,
This is a computer-generated report for Data-Babel-Client-0.02
on perl 5.18.0, created by CPAN-Reporter-1.2010.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
# Testing Data::Babel::Client 0.02, Perl 5.018000, /usr/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin/perl
t/00-load.t ............... ok
# Failed test 'found gene_mgi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_uniprot_symbol'
# at t/10-test_idtypes.t line 39.
# Failed test 'found probe_agilent'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_reactome_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_agilent_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found function_go_description'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_nature_name'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_affy_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_agilent_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_nature_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_ncbi_genbank'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_biocarta_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found transcript_ncbi_genbank_gi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_affy_gpl'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_kegg_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_lumi_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_lumi_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_kegg_title'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_lumi_gpl'
# at t/10-test_idtypes.t line 39.
# Failed test 'found sequence_agilent'
# at t/10-test_idtypes.t line 39.
# Failed test 'found gene_rgd'
# at t/10-test_idtypes.t line 39.
# Failed test 'found publication_pubmed'
# at t/10-test_idtypes.t line 39.
# Failed test 'found pathway_reactome_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found transcript_ncbi_genbank'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_ncbi_genbank_gi'
# at t/10-test_idtypes.t line 39.
# Failed test 'found protein_uniprot_description'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_affy_id'
# at t/10-test_idtypes.t line 39.
# Failed test 'found mutation_cosmic_mutated'
# at t/10-test_idtypes.t line 39.
# Failed test 'found chip_agilent_gpl'
# at t/10-test_idtypes.t line 39.
# Looks like you failed 29 tests of 82.
t/10-test_idtypes.t .......
Dubious, test returned 29 (wstat 7424, 0x1d00)
Failed 29/82 subtests
t/11-test_translate.t ..... ok
t/12-test_missing_args.t .. ok
t/13-test_bad_args.t ...... ok
t/manifest.t .............. skipped: Author tests not required for installation
t/pod-coverage.t .......... ok
t/pod.t ................... ok
Test Summary Report
-------------------
t/10-test_idtypes.t (Wstat: 7424 Tests: 82 Failed: 29)
Failed tests: 2, 5, 10, 13-14, 21-22, 25-26, 31-36, 39-41
44, 53-55, 58, 63-64, 69, 80-82
Non-zero exit status: 29
Files=8, Tests=125, 13 wallclock secs ( 0.09 usr 0.02 sys + 1.89 cusr 0.32 csys = 2.32 CPU)
Result: FAIL
Failed 1/8 test programs. 29/125 subtests failed.
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
build_requires:
Module Need Have
--------------------- ---- -------
Carp 0 1.26
Class::AutoClass 1.54 1.55
Data::Dumper 0 2.145
HTTP::Request::Common 0 6.04
JSON 0 2.59
LWP::UserAgent 0 6.05
Test::More 0 0.98_05
configure_requires:
Module Need Have
--------------------- ---- -------
Module::Build 0.36 0.4007
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
PATH = /home/cpan/perl5/perlbrew/bin:/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin:/home/cpan/perl5/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/home/cpan/bin
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 31529
PERL5_CPAN_IS_RUNNING = 31529
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 81822,31529
PERLBREW_BASHRC_VERSION = 0.66
PERLBREW_HOME = /home/cpan/.perlbrew
PERLBREW_MANPATH = /home/cpan/perl5/perlbrew/perls/perl-5.18.0/man
PERLBREW_PATH = /home/cpan/perl5/perlbrew/bin:/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin
PERLBREW_PERL = perl-5.18.0
PERLBREW_ROOT = /home/cpan/perl5/perlbrew
PERLBREW_VERSION = 0.66
PERL_CR_SMOKER_CURRENT = Data-Babel-Client-0.02
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_LOCAL_LIB_ROOT =
PERL_MB_OPT =
PERL_MM_OPT =
PERL_MM_USE_DEFAULT = 1
SHELL = /usr/local/bin/bash
TERM = xterm-256color
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /usr/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin/perl
$UID/$EUID = 1002 / 1002
$GID = 1002 1002
$EGID = 1002 1002
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.00
CPAN::Meta 2.132140
Cwd 3.40
ExtUtils::CBuilder 0.280205
ExtUtils::Command 1.17
ExtUtils::Install 1.59
ExtUtils::MakeMaker 6.73_11
ExtUtils::Manifest 1.61
ExtUtils::ParseXS 3.21
File::Spec 3.40
JSON 2.59
JSON::PP 2.27202
Module::Build 0.4007
Module::Signature n/a
Parse::CPAN::Meta 1.4405
Test::Harness 3.28
Test::More 0.98_05
YAML 0.84
YAML::Syck 1.27
version 0.9903
--
Summary of my perl5 (revision 5 version 18 subversion 0) configuration:
Platform:
osname=freebsd, osvers=9.0-release, archname=amd64-freebsd
uname='freebsd freebsd90 9.0-release freebsd 9.0-release #0: tue jan 3 07:46:30 utc 2012 root@farrell.cse.buffalo.edu:usrobjusrsrcsysgeneric amd64 '
config_args='-de -Dprefix=/home/cpan/perl5/perlbrew/perls/perl-5.18.0 -Aeval:scriptdir=/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include',
optimize='-O',
cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.2.1 20070831 patched [FreeBSD]', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags ='-Wl,-E -fstack-protector -L/usr/local/lib'
libpth=/usr/lib /usr/local/lib
libs=-lm -lcrypt -lutil -lc
perllibs=-lm -lcrypt -lutil -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
cccdlflags='-DPIC -fPIC', lddlflags='-shared -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV PERL_SAWAMPERSAND USE_64_BIT_ALL
USE_64_BIT_INT USE_LARGE_FILES USE_LOCALE
USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
Built under freebsd
Compiled at Aug 9 2013 19:40:59
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="31529"
PERL5_CPAN_IS_RUNNING="31529"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="81822,31529"
PERLBREW_BASHRC_VERSION="0.66"
PERLBREW_HOME="/home/cpan/.perlbrew"
PERLBREW_MANPATH="/home/cpan/perl5/perlbrew/perls/perl-5.18.0/man"
PERLBREW_PATH="/home/cpan/perl5/perlbrew/bin:/home/cpan/perl5/perlbrew/perls/perl-5.18.0/bin"
PERLBREW_PERL="perl-5.18.0"
PERLBREW_ROOT="/home/cpan/perl5/perlbrew"
PERLBREW_VERSION="0.66"
PERL_CR_SMOKER_CURRENT="Data-Babel-Client-0.02"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_LOCAL_LIB_ROOT=""
PERL_MB_OPT=""
PERL_MM_OPT=""
PERL_MM_USE_DEFAULT="1"
@INC:
/home/cpan/perl5/perlbrew/perls/perl-5.18.0/lib/site_perl/5.18.0/amd64-freebsd
/home/cpan/perl5/perlbrew/perls/perl-5.18.0/lib/site_perl/5.18.0
/home/cpan/perl5/perlbrew/perls/perl-5.18.0/lib/5.18.0/amd64-freebsd
/home/cpan/perl5/perlbrew/perls/perl-5.18.0/lib/5.18.0
.