Report for Bio-Biblio-1.70

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From: metabase:user:6afdd85a-1b0d-11e5-a970-51a37b051396
Subject: PASS Bio-Biblio-1.70 v5.20.2 GNU/Linux
Date: 2015-06-28T09:20:39Z

This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear carandraug,

This is a computer-generated report for Bio-Biblio-1.70
on perl 5.20.2, created by CPAN-Reporter-1.2014.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

none provided

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ............ ok
t/Biblio.t ................ ok
t/biofetch.t .............. ok
t/eutils.t ................ ok
t/References.t ............ ok
t/release-eol.t ........... skipped: these tests are for release candidate testing
t/release-mojibake.t ...... skipped: these tests are for release candidate testing
t/release-no-tabs.t ....... skipped: these tests are for release candidate testing
t/release-pod-coverage.t .. skipped: these tests are for release candidate testing
t/release-pod-syntax.t .... skipped: these tests are for release candidate testing
All tests successful.
Files=10, Tests=609, 48 wallclock secs ( 0.26 usr  0.03 sys +  7.27 cusr  0.57 csys =  8.13 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                  Need Have    
    ----------------------- ---- --------
    Bio::Annotation::DBLink 0    0       
    Bio::DB::DBFetch        0    0       
    Bio::Root::IO           0    0       
    Bio::Root::Root         0    0       
    Bio::Root::RootI        0    0       
    Data::Dumper            0    2.154   
    Getopt::Std             0    1.10    
    LWP::Simple             0    6.13    
    parent                  0    0.234   
    SOAP::Lite              0    1.13    
    strict                  0    1.08    
    Symbol                  0    1.07    
    URI::Escape             0    3.31    
    utf8                    0    1.13_01 
    vars                    0    1.03    
    warnings                0    1.23    
    XML::Parser             0    2.44    
    XML::Twig               0    3.49    

build_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    File::Find              0    1.27    
    File::Spec              0    3.47    
    File::Temp              0    0.2304  
    Test::More              0    1.001014

configure_requires:

    Module                  Need Have    
    ----------------------- ---- --------
    ExtUtils::MakeMaker     6.30 7.04    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    LANG = en_US.UTF-8
    LD_LIBRARY_PATH = /usr/lib/alliance/lib:/usr/lib/alliance/lib
    PATH = /usr/lib/qt-3.3/bin:/usr/lib/ccache:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:/usr/lib/alliance/bin:/root/bin:/usr/lib/alliance/bin
    PERL5LIB = /root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/arch:/root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 16885
    PERL5_CPAN_IS_RUNNING = 16885
    SHELL = /bin/bash
    TERM = xterm-256color

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /usr/bin/perl
    $UID/$EUID = 0 / 0
    $GID = 0 0
    $EGID = 0 0

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.05    
    CPAN::Meta          2.150005
    Cwd                 3.47    
    ExtUtils::CBuilder  0.280223
    ExtUtils::Command   1.20    
    ExtUtils::Install   2.04    
    ExtUtils::MakeMaker 7.04    
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.24    
    File::Spec          3.47    
    JSON                2.90    
    JSON::PP            2.27300 
    Module::Build       0.4214  
    Module::Signature   0.79    
    Parse::CPAN::Meta   1.4417  
    Test::Harness       3.35    
    Test::More          1.001014
    YAML                1.15    
    YAML::Syck          1.29    
    version             0.9912  


--

Summary of my perl5 (revision 5 version 20 subversion 2) configuration:
   
  Platform:
    osname=linux, osvers=3.19.5-200.fc21.x86_64, archname=i386-linux-thread-multi
    uname='linux buildhw-08.phx2.fedoraproject.org 3.19.5-200.fc21.x86_64 #1 smp mon apr 20 19:51:56 utc 2015 i686 i686 i386 gnulinux '
    config_args='-des -Doptimize=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches  -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Dccdlflags=-Wl,--enable-new-dtags -Dlddlflags=-shared -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches  -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-z,relro  -Dshrpdir=/usr/lib -DDEBUGGING=-g -Dversion=5.20.2 -Dmyhostname=localhost -Dperladmin=root@localhost -Dcc=gcc -Dcf_by=Red Hat, Inc. -Dprefix=/usr -Dvendorprefix=/usr -Dsiteprefix=/usr/local -Dsitelib=/usr/local/share/perl5 -Dsitearch=/usr/local/lib/perl5 -Dprivlib=/usr/share/perl5 -Dvendorlib=/usr/share/perl5/vendor_perl -Darchlib=/usr/lib/perl5 -Dvendorarch=/usr/lib/perl5/vendor_perl -Darchname=i386-linux-thread-multi -Duseshrplib -Dusethreads -Duseithreads -Dusedtrace=/usr/bin/dtrace -Duselargefiles -Dd_semctl_semun -Di_db -Ui_ndbm -Di_gdbm -Di_shadow -Di_syslog -Dman3ext=3pm -Duseperlio -Dinstallusrbinperl=n -Ubincompat5005 -Uversiononly -Dpager=/usr/bin/less -isr -Dd_gethostent_r_proto -Ud_endhostent_r_proto -Ud_sethostent_r_proto -Ud_endprotoent_r_proto -Ud_setprotoent_r_proto -Ud_endservent_r_proto -Ud_setservent_r_proto -Dscriptdir=/usr/bin -Dusesitecustomize'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=define, usemultiplicity=define
    use64bitint=undef, use64bitall=undef, uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables',
    cppflags='-D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
    ccversion='', gccversion='5.1.1 20150422 (Red Hat 5.1.1-1)', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='gcc', ldflags =' -fstack-protector -L/usr/local/lib'
    libpth=/usr/local/lib /usr/lib /lib
    libs=-lresolv -lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc -lgdbm_compat
    perllibs=-lresolv -lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
    libc=libc-2.21.so, so=so, useshrplib=true, libperl=libperl.so
    gnulibc_version='2.21'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,--enable-new-dtags'
    cccdlflags='-fPIC', lddlflags='-shared -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-z,relro  -L/usr/local/lib'


Characteristics of this binary (from libperl): 
  Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
                        PERL_DONT_CREATE_GVSV
                        PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
                        PERL_IMPLICIT_CONTEXT PERL_MALLOC_WRAP
                        PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
                        USE_ITHREADS USE_LARGE_FILES USE_LOCALE
                        USE_LOCALE_COLLATE USE_LOCALE_CTYPE
                        USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
                        USE_REENTRANT_API USE_SITECUSTOMIZE
  Locally applied patches:
	Fedora Patch1: Removes date check, Fedora/RHEL specific
	Fedora Patch4: use libresolv instead of libbind
	Fedora Patch5: USE_MM_LD_RUN_PATH
	Fedora Patch6: Skip hostname tests, due to builders not being network capable
	Fedora Patch7: Dont run one io test due to random builder failures
	Fedora Patch15: Define SONAME for libperl.so
	Fedora Patch16: Install libperl.so to -Dshrpdir value
	Fedora Patch22: Document Math::BigInt::CalcEmu requires Math::BigInt (CPAN RT#85015)
	Fedora Patch25: Use stronger algorithm needed for FIPS in t/op/crypt.t (RT#121591)
	Fedora Patch26: Make *DBM_File desctructors thread-safe (RT#61912)
	Fedora Patch27: Report inaccesible file on failed require (RT#123270)
	Fedora Patch28: Use stronger algorithm needed for FIPS in t/op/taint.t (RT#123338)
	Fedora Patch29: Fix Errno.pm generation for GCC 5.0 (RT#123784)
	Fedora Patch30: Handle hexadecimal constants by h2ph (RT#123784)
	Fedora Patch31: Do not use -_h2ph_pre.ph from system at tests (RT#123784)
	Fedora Patch200: Link XS modules to libperl.so with EU::CBuilder on Linux
	Fedora Patch201: Link XS modules to libperl.so with EU::MM on Linux
  Built under linux
  Compiled at Jun  5 2015 10:35:36
  %ENV:
    PERL5LIB="/root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/arch:/root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/lib"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="16885"
    PERL5_CPAN_IS_RUNNING="16885"
  @INC:
    /root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/arch
    /root/.cpan/build/Benchmark-Perl-CoreHashes-0.02-Y9e9td/blib/lib
    /usr/local/lib/perl5
    /usr/local/share/perl5
    /usr/lib/perl5/vendor_perl
    /usr/share/perl5/vendor_perl
    /usr/lib/perl5
    /usr/share/perl5
    .