Report for Algorithm-Statistic-0.03

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From: metabase:user:30f4dfbe-2aae-11df-837a-5e0a49663a4f
Subject: UNKNOWN Algorithm-Statistic-0.03 v5.12.5 Mac OS X
Date: 2015-03-25T08:21:52Z

This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear Igor Karbachinsky,

This is a computer-generated report for Algorithm-Statistic-0.03
on perl 5.12.5, created by CPAN-Reporter-1.2011.

Thank you for uploading your work to CPAN.  However, attempting to
test your distribution gave an inconclusive result.

This could be because your distribution had an error during the make/build
stage, did not define tests, tests could not be found, because your tests were
interrupted before they finished, or because the results of the tests could not
be parsed.  You may wish to consult the CPAN Testers Wiki:

http://wiki.cpantesters.org/wiki/CPANAuthorNotes

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/sw/bin/make -j4 -j4':

"/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin/perl" "/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5/ExtUtils/xsubpp"  -C++ -typemap "/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/ExtUtils/typemap"  Statistic.xs > Statistic.xsc && mv Statistic.xsc Statistic.c
Running Mkbootstrap for Algorithm::Statistic ()
chmod 644 "Statistic.bs"
cp lib/Algorithm/Statistic.pm blib/lib/Algorithm/Statistic.pm
c++ -c  -I include/ -std=c++11 -O2 -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -fstack-protector -O3   -DVERSION=\"0.03\" -DXS_VERSION=\"0.03\"  "-I/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE"   Statistic.c
clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated
In file included from Statistic.xs:7:
In file included from /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:3423:
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:230:17: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] set_cur    depth=%d\n", \
                       ^
                        
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:230:27: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] set_cur    depth=%d\n", \
                                 ^
                                  
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:248:17: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] save_local\n",          \
                       ^
                        
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:248:27: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] save_local\n",          \
                                 ^
                                  
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:256:17: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] restore_local\n",       \
                       ^
                        
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/pad.h:256:27: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
              "Pad 0x%"UVxf"[0x%"UVxf"] restore_local\n",       \
                                 ^
                                  
In file included from Statistic.xs:7:
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:4250:75: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
  INIT("Modification of non-creatable hash value attempted, subscript \"%"SVf"\"");
                                                                          ^
                                                                           
In file included from Statistic.xs:9:
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:319:50: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
                xpt = Perl_newSVpvf(aTHX_ "%s object version %"SVf      \
                                                               ^
                                                                
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:320:37: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal]
                                    " does not match %s%s%s%s %"SVf,    \
                                                                ^
                                                                 
In file included from Statistic.xs:20:
In file included from include/kth_order_statistic.hpp:12:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/iostream:40:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/istream:156:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/ostream:133:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3640:35: error: too few arguments provided to function-like macro invocation
        return do_open(__nm, __loc);
                                  ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:6054:9: note: macro 'do_open' defined here
#define do_open(g, n, l, a, rm, rp, sf) \
        ^
In file included from Statistic.xs:20:
In file included from include/kth_order_statistic.hpp:12:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/iostream:40:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/istream:156:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/ostream:133:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3662:69: error: too few arguments provided to function-like macro invocation
    virtual catalog do_open(const basic_string<char>&, const locale&) const;
                                                                    ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:6054:9: note: macro 'do_open' defined here
#define do_open(g, n, l, a, rm, rp, sf) \
        ^
In file included from Statistic.xs:20:
In file included from include/kth_order_statistic.hpp:12:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/iostream:40:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/istream:156:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/ostream:133:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3662:5: error: 'virtual' can only appear on non-static member functions
    virtual catalog do_open(const basic_string<char>&, const locale&) const;
    ^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3662:28: error: expected ';' at end of declaration list
    virtual catalog do_open(const basic_string<char>&, const locale&) const;
                           ^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3674:72: error: too few arguments provided to function-like macro invocation
messages<_CharT>::do_open(const basic_string<char>& __nm, const locale&) const
                                                                       ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:6054:9: note: macro 'do_open' defined here
#define do_open(g, n, l, a, rm, rp, sf) \
        ^
In file included from Statistic.xs:20:
In file included from include/kth_order_statistic.hpp:12:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/iostream:40:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/istream:156:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/ostream:133:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3674:19: error: non-static data member defined out-of-line
messages<_CharT>::do_open(const basic_string<char>& __nm, const locale&) const
~~~~~~~~~~~~~~~~~~^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3674:26: error: expected ';' at end of declaration
messages<_CharT>::do_open(const basic_string<char>& __nm, const locale&) const
                         ^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/locale:3675:1: error: expected unqualified-id
{
^
Statistic.c:264:11: warning: 'register' storage class specifier is deprecated [-Wdeprecated-register]
    dVAR; dXSARGS;
          ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:144:7: note: expanded from macro 'dXSARGS'
        dSP; dAXMARK; dITEMS
             ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:134:2: note: expanded from macro 'dAXMARK'
        register SV **mark = PL_stack_base + ax++
        ^
Statistic.xs:150:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
            warn(e.what()); 
                 ^~~~~~~~
Statistic.c:324:11: warning: 'register' storage class specifier is deprecated [-Wdeprecated-register]
    dVAR; dXSARGS;
          ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:144:7: note: expanded from macro 'dXSARGS'
        dSP; dAXMARK; dITEMS
             ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:134:2: note: expanded from macro 'dAXMARK'
        register SV **mark = PL_stack_base + ax++
        ^
Statistic.xs:197:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
            warn(e.what()); 
                 ^~~~~~~~
Statistic.c:382:1: warning: duplicate 'extern' declaration specifier [-Wduplicate-decl-specifier]
XS_EXTERNAL(boot_Algorithm__Statistic); /* prototype to pass -Wmissing-prototypes */
^
Statistic.c:173:35: note: expanded from macro 'XS_EXTERNAL'
#        define XS_EXTERNAL(name) extern "C" XSPROTO(name)
                                  ^
Statistic.c:385:5: error: declaration of 'Perl___notused' has a different language linkage
    dVAR; dXSARGS;
    ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:162:17: note: expanded from macro 'dVAR'
#  define dVAR          dNOOP
                        ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:340:39: note: expanded from macro 'dNOOP'
#define dNOOP extern int /*@unused@*/ Perl___notused PERL_UNUSED_DECL
                                      ^
Statistic.xs:31:9: note: previous definition is here
        dTHX; 
        ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:352:17: note: expanded from macro 'dTHX'
#  define dTHX          dNOOP
                        ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/perl.h:340:39: note: expanded from macro 'dNOOP'
#define dNOOP extern int /*@unused@*/ Perl___notused PERL_UNUSED_DECL
                                      ^
Statistic.c:385:11: warning: 'register' storage class specifier is deprecated [-Wdeprecated-register]
    dVAR; dXSARGS;
          ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:144:7: note: expanded from macro 'dXSARGS'
        dSP; dAXMARK; dITEMS
             ^
/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level/CORE/XSUB.h:134:2: note: expanded from macro 'dAXMARK'
        register SV **mark = PL_stack_base + ax++
        ^
6 warnings and 18 errors generated.
make: *** [Statistic.o] Error 1

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module              Need Have    
    ------------------- ---- --------
    Exporter            5.57 5.70    
    Test::More          0    1.001014
    Test::Requires      0    0.08    

build_requires:

    Module              Need Have    
    ------------------- ---- --------
    ExtUtils::MakeMaker 0    7.04    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = en_US.UTF-8
    LC_ALL = POSIX
    LD_LIBRARY_PATH = :/net/traces01.be-md.ncbi.nlm.nih.gov/trace_software/vdb/mac/release/x86_64/lib
    PATH = /Users/hornenj/perl5/perlbrew/bin:/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin:/Users/hornenj/perl5/perlbrew/bin:/Users/hornenj/perl5/perlbrew/perls/perl-5.21.9/bin:/Users/hornenj/bin:/sw/lib/perl5/ExtUtils:/sw/bin:/am/ncbiapdata/bin:/usr/bin:/bin:/usr/X11R6/bin:/netopt/ncbi_tools/bin:/usr/local/ncbi/blast/bin:/net/traces01.be-md.ncbi.nlm.nih.gov/trace_software/vdb/mac/release/x86_64/bin
    PERL = /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin/perl
    PERL5LIB = 
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 30061
    PERL5_CPAN_IS_RUNNING = 30061
    PERL5_MINISMOKEBOX = 0.58
    PERLBREW_BASHRC_VERSION = 0.73
    PERLBREW_HOME = /Users/hornenj/.perlbrew
    PERLBREW_LIB = 
    PERLBREW_MANPATH = /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/man
    PERLBREW_PATH = /Users/hornenj/perl5/perlbrew/bin:/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin
    PERLBREW_PERL = perl-5.12.5
    PERLBREW_ROOT = /Users/hornenj/perl5/perlbrew
    PERLBREW_VERSION = 0.73
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_LOCAL_LIB_ROOT = 
    PERL_MM_USE_DEFAULT = 1
    SHELL = /bin/bash
    TERM = xterm-256color
    TMPDIR = /var/folders/pz/pd7y1qjs6s3cbk170cw50fjc000c61/T/
    VERSIONER_PERL_PREFER_32_BIT = no
    VERSIONER_PERL_VERSION = 5.18
    ac_cv_path_INTLTOOL_PERL = /usr/bin/perl

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin/perl
    $UID/$EUID = 12481 / 12481
    $GID = 14 14 5344 527 241
    $EGID = 14 14 5344 527 241

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.10    
    CPAN::Meta          2.142690
    Cwd                 3.47    
    ExtUtils::CBuilder  0.280219
    ExtUtils::Command   1.18    
    ExtUtils::Install   1.68    
    ExtUtils::MakeMaker 7.04    
    ExtUtils::Manifest  1.65    
    ExtUtils::ParseXS   3.24    
    File::Spec          3.47    
    JSON                2.90    
    JSON::PP            2.27203 
    Module::Build       0.4210  
    Module::Signature   n/a     
    Parse::CPAN::Meta   1.4414  
    Test::Harness       3.33    
    Test::More          1.001014
    YAML                1.11    
    YAML::Syck          1.29    
    version             0.9908  


--

Summary of my perl5 (revision 5 version 12 subversion 5) configuration:
   
  Platform:
    osname=darwin, osvers=12.2.1, archname=darwin-2level
    uname='darwin ncbimac2008.ncbi.nlm.nih.gov 12.2.1 darwin kernel version 12.2.1: thu oct 18 12:13:47 pdt 2012; root:xnu-2050.20.9~1release_x86_64 x86_64 '
    config_args='-de -Dprefix=/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=undef, usemultiplicity=undef
    useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
    use64bitint=define, use64bitall=define, uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -fstack-protector',
    optimize='-O3',
    cppflags='-no-cpp-precomp -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -fstack-protector'
    ccversion='', gccversion='4.2.1 Compatible Apple LLVM 4.2 (clang-425.0.24)', gccosandvers=''
    intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
    ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=8, prototype=define
  Linker and Libraries:
    ld='env MACOSX_DEPLOYMENT_TARGET=10.3 cc', ldflags =' -fstack-protector'
    libpth=/usr/lib
    libs=-ldbm -ldl -lm -lutil -lc
    perllibs=-ldl -lm -lutil -lc
    libc=, so=dylib, useshrplib=false, libperl=libperl.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=bundle, d_dlsymun=undef, ccdlflags=' '
    cccdlflags=' ', lddlflags=' -bundle -undefined dynamic_lookup -fstack-protector'


Characteristics of this binary (from libperl): 
  Compile-time options: PERL_DONT_CREATE_GVSV PERL_MALLOC_WRAP USE_64_BIT_ALL
                        USE_64_BIT_INT USE_LARGE_FILES USE_PERLIO
                        USE_PERL_ATOF
  Built under darwin
  Compiled at Mar  5 2013 11:08:14
  %ENV:
    PERL="/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin/perl"
    PERL5LIB=""
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="30061"
    PERL5_CPAN_IS_RUNNING="30061"
    PERL5_MINISMOKEBOX="0.58"
    PERLBREW_BASHRC_VERSION="0.73"
    PERLBREW_HOME="/Users/hornenj/.perlbrew"
    PERLBREW_LIB=""
    PERLBREW_MANPATH="/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/man"
    PERLBREW_PATH="/Users/hornenj/perl5/perlbrew/bin:/Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/bin"
    PERLBREW_PERL="perl-5.12.5"
    PERLBREW_ROOT="/Users/hornenj/perl5/perlbrew"
    PERLBREW_VERSION="0.73"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_LOCAL_LIB_ROOT=""
    PERL_MM_USE_DEFAULT="1"
  @INC:
    /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5/darwin-2level
    /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/site_perl/5.12.5
    /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5/darwin-2level
    /Users/hornenj/perl5/perlbrew/perls/perl-5.12.5/lib/5.12.5
    .