Bio-Tools-Run-Alignment-TCoffee v1.7.2 Perl 5 v5.26.0 MSWin32-x64-multi-thread

Status
Fail
From
David Solimano
Dist
Bio-Tools-Run-Alignment-TCoffee v1.7.2
Platform
Perl 5 v5.26.0 MSWin32-x64-multi-thread
Date
2017-09-15T18:51:24
ID
fe3e3456-d140-1014-906c-3cf15f496936
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear carandraug,

This is a computer-generated report for Bio-Tools-Run-Alignment-TCoffee-1.7.2
on perl 5.26.0, created by CPAN-Reporter-1.2018.

Thank you for uploading your work to CPAN.  However, there was a problem
testing your distribution.

If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:

http://wiki.cpantesters.org/wiki/CPANAuthorNotes

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from 'C:\STRAWB~1\c\bin\gmake.exe test':

"C:\Strawberry\perl\bin\perl.exe" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib\lib', 'blib\arch')" t/*.t
Use of uninitialized value $ENV{"HOME"} in string at C:\STRAWB~1\cpan\build\Bio-Tools-Run-Alignment-TCoffee-1.7.2-0\blib\lib/Bio/Installer/TCoffee.pm line 21.
t/00-compile.t ........... ok
t/author-eol.t ........... skipped: these tests are for testing by the author
t/author-mojibake.t ...... skipped: these tests are for testing by the author
t/author-no-tabs.t ....... skipped: these tests are for testing by the author
t/author-pod-coverage.t .. skipped: these tests are for testing by the author
t/author-pod-syntax.t .... skipped: these tests are for testing by the author

#   Failed test 't_coffee in PATH'
#   at t/requires_external.t line 8.
# Looks like you failed 1 test of 1.
t/requires_external.t .... 
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/1 subtests 

------------- EXCEPTION: Bio::Root::Exception -------------
MSG: Cannot find executable for t_coffee. path="t_coffee.exe"
STACK: Error::throw
STACK: Bio::Root::Root::throw C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/lib/Bio/Root/Root.pm:447
STACK: Bio::Tools::Run::WrapperBase::executable C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/lib/Bio/Tools/Run/WrapperBase.pm:340
STACK: Bio::Tools::Run::Alignment::TCoffee::version C:\STRAWB~1\cpan\build\Bio-Tools-Run-Alignment-TCoffee-1.7.2-0\blib\lib/Bio/Tools/Run/Alignment/TCoffee.pm:123
STACK: t/TCoffee.t:47
-----------------------------------------------------------
# Tests were run but no plan was declared and done_testing() was not seen.
# Looks like your test exited with 2 just after 3.
t/TCoffee.t .............. 
Dubious, test returned 2 (wstat 512, 0x200)
All 3 subtests passed 

Test Summary Report
-------------------
t/requires_external.t  (Wstat: 256 Tests: 1 Failed: 1)
  Failed test:  1
  Non-zero exit status: 1
t/TCoffee.t            (Wstat: 512 Tests: 3 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
Files=8, Tests=6,  5 wallclock secs ( 0.11 usr +  0.11 sys =  0.22 CPU)
Result: FAIL
Failed 2/8 test programs. 1/6 subtests failed.
gmake: *** [Makefile:896: test_dynamic] Error 2

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                            Need  Have    
    --------------------------------- ----- --------
    Bio::AlignIO                      0     0       
    Bio::Factory::ApplicationFactoryI 0     0       
    Bio::Installer::Generic           0     0       
    Bio::Root::IO                     0     0       
    Bio::Root::Root                   0     1.007002
    Bio::Seq                          0     0       
    Bio::SeqIO                        0     0       
    Bio::SimpleAlign                  0     0       
    Bio::Tools::Run::WrapperBase      0     1.007002
    Cwd                               0     3.67    
    perl                              5.006 5.026000
    strict                            0     1.11    
    utf8                              0     1.19    
    vars                              0     1.03    
    warnings                          0     1.37    

build_requires:

    Module                            Need  Have    
    --------------------------------- ----- --------
    blib                              1.01  1.06    
    Env::Path                         0.18  0.19    
    ExtUtils::MakeMaker               0     7.28    
    File::Spec                        0     3.67    
    IO::Handle                        0     1.36    
    IPC::Open3                        0     1.20    
    Test::Exception                   0     0.43    
    Test::More                        0     1.302085
    Test::Most                        0     0.35    

configure_requires:

    Module                            Need  Have    
    --------------------------------- ----- --------
    ExtUtils::MakeMaker               0     7.28    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    COMSPEC = C:\Windows\system32\cmd.exe
    INCLUDE = C:\Program Files\IBM\WebSphere MQ\tools\c\include;C:\Program Files\IBM\WebSphere MQ\tools\cplus\include
    LIB = C:\Program Files\IBM\WebSphere MQ\tools\lib64;C:\Program Files\IBM\WebSphere MQ\tools\lib
    NUMBER_OF_PROCESSORS = 2
    PATH = C:\ProgramData\Oracle\Java\javapath;C:\Program Files\IBM\WebSphere MQ\java\lib;C:\Program Files\IBM\WebSphere MQ\java\lib64;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShell\v1.0\;C:\Program Files\IBM\WebSphere MQ\bin64;C:\Program Files\IBM\WebSphere MQ\bin;C:\Program Files\IBM\WebSphere MQ\tools\c\samples\bin;C:\RV\BIN;C:\Strawberry\c\bin;C:\Strawberry\perl\site\bin;C:\Strawberry\perl\bin
    PERL5LIB = C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/arch;C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/lib;C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/arch;C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/lib;C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/arch;C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/lib;C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/arch;C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/lib;C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/arch;C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/lib;C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/arch;C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/lib;C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/arch;C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/lib;C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/arch;C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/lib;C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/arch;C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/lib;C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/arch;C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/lib;C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/arch;C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/lib;C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/arch;C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/lib;C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/arch;C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/lib;C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/arch;C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/lib;C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/arch;C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/lib;C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/arch;C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/lib;C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/arch;C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/lib;C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/arch;C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/lib;C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/arch;C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/lib;C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/arch;C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/lib;C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/arch;C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/lib;C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/arch;C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/lib;C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/arch;C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/lib;C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/arch;C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/lib;C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/arch;C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/lib;C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/arch;C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/lib;C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/arch;C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/lib;C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/arch;C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/lib;C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/arch;C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/lib;C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/arch;C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/lib;C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/arch;C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/lib;C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/arch;C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/lib;C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/arch;C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/lib;C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/arch;C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/lib;C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/arch;C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/lib;C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/arch;C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/lib;C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/arch;C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/lib;C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/arch;C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/lib;C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/arch;C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/lib;C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/arch;C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/lib;C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/arch;C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 16556
    PERL5_CPAN_IS_RUNNING = 16556
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 6516,16556
    PERL_CR_SMOKER_CURRENT = Bio-Tools-Run-Alignment-TCoffee-1.7.2
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_MM_USE_DEFAULT = 1
    PERL_USE_UNSAFE_INC = 1
    PROCESSOR_IDENTIFIER = Intel64 Family 6 Model 37 Stepping 1, GenuineIntel
    TEMP = C:\Users\SOLIMA~1\AppData\Local\Temp

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = C:\Strawberry\perl\bin\perl.exe
    $UID/$EUID = 0 / 0
    $GID = 0
    $EGID = 0
    Win32::GetOSName = Win2012
    Win32::GetOSVersion = , 6, 3, 9600, 2, 0, 0, 272, 3
    Win32::FsType = NTFS
    Win32::IsAdminUser = 1

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.18    
    CPAN::Meta          2.150010
    Cwd                 3.67    
    ExtUtils::CBuilder  0.280225
    ExtUtils::Command   7.28    
    ExtUtils::Install   2.14    
    ExtUtils::MakeMaker 7.28    
    ExtUtils::Manifest  1.70    
    ExtUtils::ParseXS   3.34    
    File::Spec          3.67    
    JSON                2.94    
    JSON::PP            2.94    
    Module::Build       0.4224  
    Module::Signature   n/a     
    Parse::CPAN::Meta   2.150010
    Test::Harness       3.39    
    Test::More          1.302085
    YAML                1.23    
    YAML::Syck          1.30    
    version             0.9918  


--

Summary of my perl5 (revision 5 version 26 subversion 0) configuration:
   
  Platform:
    osname=MSWin32
    osvers=6.3
    archname=MSWin32-x64-multi-thread
    uname='Win32 strawberry-perl 5.26.0.1 #1 Wed May 31 04:42:31 2017 x64'
    config_args='undef'
    hint=recommended
    useposix=true
    d_sigaction=undef
    useithreads=define
    usemultiplicity=define
    use64bitint=define
    use64bitall=undef
    uselongdouble=undef
    usemymalloc=n
    default_inc_excludes_dot=define
    bincompat5005=undef
  Compiler:
    cc='gcc'
    ccflags =' -s -O2 -DWIN32 -DWIN64 -DCONSERVATIVE -D__USE_MINGW_ANSI_STDIO -DPERL_TEXTMODE_SCRIPTS -DPERL_IMPLICIT_CONTEXT -DPERL_IMPLICIT_SYS -DUSE_PERLIO -fwrapv -fno-strict-aliasing -mms-bitfields'
    optimize='-s -O2'
    cppflags='-DWIN32'
    ccversion=''
    gccversion='7.1.0'
    gccosandvers=''
    intsize=4
    longsize=4
    ptrsize=8
    doublesize=8
    byteorder=12345678
    doublekind=3
    d_longlong=define
    longlongsize=8
    d_longdbl=define
    longdblsize=16
    longdblkind=3
    ivtype='long long'
    ivsize=8
    nvtype='double'
    nvsize=8
    Off_t='long long'
    lseeksize=8
    alignbytes=8
    prototype=define
  Linker and Libraries:
    ld='g++'
    ldflags ='-s -L"C:\STRAWB~1\perl\lib\CORE" -L"C:\STRAWB~1\c\lib"'
    libpth=C:\STRAWB~1\c\lib C:\STRAWB~1\c\x86_64-w64-mingw32\lib C:\STRAWB~1\c\lib\gcc\x86_64-w64-mingw32\7.1.0
    libs= -lmoldname -lkernel32 -luser32 -lgdi32 -lwinspool -lcomdlg32 -ladvapi32 -lshell32 -lole32 -loleaut32 -lnetapi32 -luuid -lws2_32 -lmpr -lwinmm -lversion -lodbc32 -lodbccp32 -lcomctl32
    perllibs= -lmoldname -lkernel32 -luser32 -lgdi32 -lwinspool -lcomdlg32 -ladvapi32 -lshell32 -lole32 -loleaut32 -lnetapi32 -luuid -lws2_32 -lmpr -lwinmm -lversion -lodbc32 -lodbccp32 -lcomctl32
    libc=
    so=dll
    useshrplib=true
    libperl=libperl526.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_win32.xs
    dlext=xs.dll
    d_dlsymun=undef
    ccdlflags=' '
    cccdlflags=' '
    lddlflags='-mdll -s -L"C:\STRAWB~1\perl\lib\CORE" -L"C:\STRAWB~1\c\lib"'


Characteristics of this binary (from libperl): 
  Compile-time options:
    HAS_TIMES
    HAVE_INTERP_INTERN
    MULTIPLICITY
    PERLIO_LAYERS
    PERL_COPY_ON_WRITE
    PERL_DONT_CREATE_GVSV
    PERL_IMPLICIT_CONTEXT
    PERL_IMPLICIT_SYS
    PERL_MALLOC_WRAP
    PERL_OP_PARENT
    PERL_PRESERVE_IVUV
    USE_64_BIT_INT
    USE_ITHREADS
    USE_LARGE_FILES
    USE_LOCALE
    USE_LOCALE_COLLATE
    USE_LOCALE_CTYPE
    USE_LOCALE_NUMERIC
    USE_LOCALE_TIME
    USE_PERLIO
    USE_PERL_ATOF
  Built under MSWin32
  Compiled at May 31 2017 04:57:43
  %ENV:
    PERL5LIB="C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/arch;C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/lib;C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/arch;C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/lib;C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/arch;C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/lib;C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/arch;C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/lib;C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/arch;C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/lib;C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/arch;C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/lib;C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/arch;C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/lib;C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/arch;C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/lib;C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/arch;C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/lib;C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/arch;C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/lib;C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/arch;C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/lib;C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/arch;C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/lib;C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/arch;C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/lib;C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/arch;C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/lib;C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/arch;C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/lib;C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/arch;C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/lib;C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/arch;C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/lib;C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/arch;C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/lib;C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/arch;C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/lib;C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/arch;C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/lib;C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/arch;C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/lib;C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/arch;C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/lib;C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/arch;C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/lib;C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/arch;C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/lib;C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/arch;C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/lib;C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/arch;C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/lib;C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/arch;C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/lib;C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/arch;C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/lib;C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/arch;C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/lib;C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/arch;C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/lib;C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/arch;C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/lib;C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/arch;C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/arch;C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/lib;C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/arch;C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/lib;C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/arch;C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/lib;C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/arch;C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/lib;C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/arch;C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/lib;C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/arch;C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/lib;C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/arch;C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/lib;C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/arch;C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/lib;C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/arch;C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/lib;C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/arch;C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/lib;C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/arch;C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/lib;C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/arch;C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/lib"
    PERL5_CPANPLUS_IS_RUNNING="16556"
    PERL5_CPAN_IS_RUNNING="16556"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="6516,16556"
    PERL_CR_SMOKER_CURRENT="Bio-Tools-Run-Alignment-TCoffee-1.7.2"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_MM_USE_DEFAULT="1"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/arch
    C:\STRAWB~1\cpan\build\Env-Path-0.19-1/blib/lib
    C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/arch
    C:\STRAWB~1\cpan\build\File-Sort-1.01-1/blib/lib
    C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/arch
    C:\STRAWB~1\cpan\build\BioPerl-Run-1.007002-1/blib/lib
    C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/arch
    C:\STRAWB~1\cpan\build\Algorithm-Munkres-0.08-1/blib/lib
    C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/arch
    C:\STRAWB~1\cpan\build\Array-Compare-v3.0.0-1/blib/lib
    C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/arch
    C:\STRAWB~1\cpan\build\Devel-LexAlias-0.05-2/blib/lib
    C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/arch
    C:\STRAWB~1\cpan\build\Devel-Caller-2.06-2/blib/lib
    C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/arch
    C:\STRAWB~1\cpan\build\Ref-Util-XS-0.116-2/blib/lib
    C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/arch
    C:\STRAWB~1\cpan\build\Regexp-Util-0.003-2/blib/lib
    C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/arch
    C:\STRAWB~1\cpan\build\Hash-FieldHash-0.15-2/blib/lib
    C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/arch
    C:\STRAWB~1\cpan\build\Type-Tie-0.009-2/blib/lib
    C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/arch
    C:\STRAWB~1\cpan\build\Type-Tiny-XS-0.012-2/blib/lib
    C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/arch
    C:\STRAWB~1\cpan\build\Type-Tiny-1.002001-2/blib/lib
    C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/arch
    C:\STRAWB~1\cpan\build\Math-CDF-0.1-1/blib/lib
    C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/arch
    C:\STRAWB~1\cpan\build\Math-Random-0.72-1/blib/lib
    C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/arch
    C:\STRAWB~1\cpan\build\PDF-API2-2.033-1/blib/lib
    C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/arch
    C:\STRAWB~1\cpan\build\Test-Memory-Cycle-1.06-1/blib/lib
    C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/arch
    C:\STRAWB~1\cpan\build\PadWalker-2.2-2/blib/lib
    C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/arch
    C:\STRAWB~1\cpan\build\Devel-Cycle-1.12-1/blib/lib
    C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/arch
    C:\STRAWB~1\cpan\build\Font-TTF-1.06-1/blib/lib
    C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/arch
    C:\STRAWB~1\cpan\build\SWF-File-0.42-1/blib/lib
    C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/arch
    C:\STRAWB~1\cpan\build\Data-TemporaryBag-0.09-1/blib/lib
    C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/arch
    C:\STRAWB~1\cpan\build\YAML-Syck-1.30-1/blib/lib
    C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/arch
    C:\STRAWB~1\cpan\build\Devel-Leak-0.03-1/blib/lib
    C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/arch
    C:\STRAWB~1\cpan\build\Bio-Phylo-0.58-1/blib/lib
    C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/arch
    C:\STRAWB~1\cpan\build\Convert-Binary-C-0.78-1/blib/lib
    C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/arch
    C:\STRAWB~1\cpan\build\Error-0.17025-1/blib/lib
    C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/arch
    C:\STRAWB~1\cpan\build\Graph-0.9704-2/blib/lib
    C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/arch
    C:\STRAWB~1\cpan\build\HTML-TableExtract-2.15-1/blib/lib
    C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/arch
    C:\STRAWB~1\cpan\build\Win32-IPC-1.11-1/blib/lib
    C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/arch
    C:\STRAWB~1\cpan\build\Pegex-0.63-1/blib/lib
    C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/arch
    C:\STRAWB~1\cpan\build\Inline-0.80-1/blib/lib
    C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/arch
    C:\STRAWB~1\cpan\build\PostScript-0.06-1/blib/lib
    C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/arch
    C:\STRAWB~1\cpan\build\SVG-Graph-0.02-1/blib/lib
    C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/arch
    C:\STRAWB~1\cpan\build\Statistics-Descriptive-3.0612-1/blib/lib
    C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/arch
    C:\STRAWB~1\cpan\build\SVG-2.78-1/blib/lib
    C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/arch
    C:\STRAWB~1\cpan\build\Math-Spline-0.02-1/blib/lib
    C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/arch
    C:\STRAWB~1\cpan\build\Math-Derivative-1.01-1/blib/lib
    C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/arch
    C:\STRAWB~1\cpan\build\Math-Utils-1.11-1/blib/lib
    C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/arch
    C:\STRAWB~1\cpan\build\Set-Scalar-1.29-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/arch
    C:\STRAWB~1\cpan\build\XML-XPathEngine-0.14-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/arch
    C:\STRAWB~1\cpan\build\XML-DOM-1.46-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/arch
    C:\STRAWB~1\cpan\build\XML-RegExp-0.04-1/blib/lib
    C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/arch
    C:\STRAWB~1\cpan\build\libxml-perl-0.08-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/arch
    C:\STRAWB~1\cpan\build\XML-SAX-Writer-0.57-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/arch
    C:\STRAWB~1\cpan\build\XML-Filter-BufferText-1.01-1/blib/lib
    C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/arch
    C:\STRAWB~1\cpan\build\XML-Writer-0.625-2/blib/lib
    C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/arch
    C:\STRAWB~1\cpan\build\BioPerl-1.007002-1/blib/lib
    C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/arch
    C:\STRAWB~1\cpan\build\Test-Most-0.35-2/blib/lib
    C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/arch
    C:\STRAWB~1\cpan\build\Data-Stag-0.14-1/blib/lib
    C:/Strawberry/perl/site/lib/MSWin32-x64-multi-thread
    C:/Strawberry/perl/site/lib
    C:/Strawberry/perl/vendor/lib
    C:/Strawberry/perl/lib
    .